| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1815 |
|---|
| Symbol | rluB |
|---|
| ID | 1183456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1983025 |
|---|
| End bp | 1984251 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ribosomal large subunit pseudouridine synthase B |
|---|
| Protein accession | YP_001740050 |
|---|
| Protein GI | 170660220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA AAGACAAGCA GGACAGCCAG GAAATCGGAC CCGCAGGCGA AAAGCTGCAG
AAGGTTCTGG CGCGCATTGG CGTGGGTTCA CGCCGTGACG TAGAGGCCTG GATTACCCAG
GGCCGTATCA AGGTCAATGG CAAGGACGCG ACCCTCGGTC AGCGCGTTGA CCTGCATGAC
GCCATCAGTG TCGATGGTCG CGTCATCAAG CGCGAAGAAG CGGCTGAAAC AGTCCGTCGC
GTCATCATGT ACAACAAGCC CGATGGCGAA ATCTGCACCC GTGACGACCC GGAAGGCCGT
CCGACCGTGT TCGATCGTCT GCCGCGTCCT AAAGAAGGTC GCTGGATCAA CATCGGTCGT
CTCGACATCA ACACCACCGG GCTGCTGATG TTCACCACCG ACGGTGAACT CGCCAACCGC
CTGATGCACC CCTCGTTCGA AATGGACCGT GAATACGCGG TTCGTGTGCG TGGCGAAGTC
GATGACGACA TGCTGCTGCG CCTCAAGAAC GGCGTGATCC TCGAAGACGG GCCTGCCCGT
TTTACCGACA TCAAGCAGGC GCCGGGCGGC GAAGGCTTCA ACCACTGGTA CCACTGCGTG
GTGATGGAAG GCCGTAACCG CGAAGTACGT CGCCTGTGGG AATCCCAGGG GCTGGTGGTC
AGCCGTCTGA AGCGTGTGCG TTACGGGCCG GTGTTCCTCA ACTCCGACCT GCCGATGGGC
CGCTGGCGCG AAATGAGCCA GTACGAAGTC GACATTCTGT CTGCCGAAGT CGGTCTGCAA
CCTGTGGCTC AGCCGCAGAT GAACGCCAAG ACCAAGGACA AGATGGAGCG TCTGCAACGT
CAATCCTCGC GCCCGCTGGG CAAAGGCGAG CGCGTAGTTC GTACGCTGCG TCCTGCGGCT
GGCGCTCCGG CGACCGGCGA TCGTACGCCG CGTCAGCCGC AGATCACCGG CAGCGAGCGT
GATCGTCCGC GTGGCGGCGA CTCTACTCAG CGTCCTGTGC GCAAGGACTC GGGCAAGCCC
GGTTCGCGTG CACCGCGTCC GGCTGACAAC AGCCGTGGCA CACCGGTCGC CGAGCGTCCG
AGCGACATGA ACAAGCGTCC GGCCAAGCCT GGGCCCAAGC GTGTCGGCAT CAAGCTGGTG
AACGATGATG CGCCGTCAGG CAAGCGTCGC GGTCCACCGG CAGGCTCGGG CCAGCGCCCT
GGCTTCGGTC GTCGCAAGCC TGAGTGA
|
|---|
| Protein sequence | MSEKDKQDSQ EIGPAGEKLQ KVLARIGVGS RRDVEAWITQ GRIKVNGKDA TLGQRVDLHD
AISVDGRVIK REEAAETVRR VIMYNKPDGE ICTRDDPEGR PTVFDRLPRP KEGRWINIGR
LDINTTGLLM FTTDGELANR LMHPSFEMDR EYAVRVRGEV DDDMLLRLKN GVILEDGPAR
FTDIKQAPGG EGFNHWYHCV VMEGRNREVR RLWESQGLVV SRLKRVRYGP VFLNSDLPMG
RWREMSQYEV DILSAEVGLQ PVAQPQMNAK TKDKMERLQR QSSRPLGKGE RVVRTLRPAA
GAPATGDRTP RQPQITGSER DRPRGGDSTQ RPVRKDSGKP GSRAPRPADN SRGTPVAERP
SDMNKRPAKP GPKRVGIKLV NDDAPSGKRR GPPAGSGQRP GFGRRKPE
|
|---|
| |