Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1803 |
Symbol | |
ID | 1183444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1975082 |
End bp | 1976434 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393179 |
Product | sensor histidine kinase |
Protein accession | NP_791628 |
Protein GI | 28869009 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.43373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTCAT TGTTCTGGCG AATCCTGGCC AGCTTCTGGC TGGCCATCGC TCTGGTTGCA GGGCTGTCGG TACTGCTGGG GCATATGCTC GACCAGGATG CGTGGATCCT CAACCGCCAC CCGGTGCTCA ACTCGTTGCC AGAAAACTGG ACACAGCGCT TCGAGGAAAA CGGTGCCGAC AGCGCTCAGG ATTTTCTACA GGACATCAAA CGGCGTAACC GCATCGATGT TCAGGTGCTC AGCGACAGCG GCGAACCGGT CATACGCGGC ACCTTCCCGC CACGCGCTGC CGCGTTTGAA GCCCGTCAGC AGGAAGACGC CGACGAAAAC GGCCGCAAAC TGCCCTGGCG CCGGTTGGCC ACCGAATACA GCAGCCCGAA GACCGGCGAA ACCTATCTGT TCATCTACCG CATCCCGCAC CCGGAACTTG ACGCCTGGCA TCGCCAGAGC CTGATGTGGC CGCTGAGTGC GCTGGGTATC GCACTGGTGG TTCTGACCCT GTTCAGCCTG TTTGTGACAC TCTCGATCAC CCGCCCGCTG AGCCGTCTGC GCGGTGCCGT GCATGATTTG GGGCAGACCA GCTATCAACA GCACAGCATC GGCCAGTTGG CCAACCGCCG CGACGAGTTT GGCGTGCTGG CCACTGATTT CAACCGCATG GGTGCGCGCC TGCAAAGCCT GATCGGCAGT CAGCGTCAGC TGTTGCGCGA TGTGTCACAC GAGTTGCGCT CGCCTCTGGC CCGACTGCGC ATTGCTCTGG CACTGGCTGA ACGCGCAGAA CCTGCCGAGC GTGAAAAGCT CTGGCCGCGT CTGGGCCGTG AATGTGACCG ACTGGAAGCG CTGATCAGCG AGATTCTGGC GTTGGCGCGT CTGGACGCAG ATTTCGGCGG GCCTGAGCCA GTCGATCTGA ACGAGCTGTT GCACCGACTG AAAAACGACA CGCACCTGGA CGGTGCCGAA CAGCATATTC AGGTCGAGGT GCAGCACGAT CTGCACCTGC AAGGCTGGCC GGACATGATC GAGCGGGCGC TGGACAACCT GCTGCGCAAC GCCCTGCGCT TCAACCCGGC CGGGCAGCGG ATAGACTTGC AAGCGATTCA GGTCGGCGAT CGAGTCAGCC TGAGCGTTCG CGACCACGGC CCAGGCGTTG CCGACGAGCA CCTGGCGCAA CTGGGCGAAC CGTTTTACCG TGCCCCCGGC CAGAGCACGC CGGGCCACGG CCTGGGGTTG GCGATTGCCA AACGCGCCGC CGAGCGGCAC GGCGGCAACC TGATACTGGG CAATCATCCG GACGGCGGGT TCATTGCCAC CCTTGACATG CCAAGAGAGC CGATCAGCCC TTCATCGGTT TAG
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Protein sequence | MRSLFWRILA SFWLAIALVA GLSVLLGHML DQDAWILNRH PVLNSLPENW TQRFEENGAD SAQDFLQDIK RRNRIDVQVL SDSGEPVIRG TFPPRAAAFE ARQQEDADEN GRKLPWRRLA TEYSSPKTGE TYLFIYRIPH PELDAWHRQS LMWPLSALGI ALVVLTLFSL FVTLSITRPL SRLRGAVHDL GQTSYQQHSI GQLANRRDEF GVLATDFNRM GARLQSLIGS QRQLLRDVSH ELRSPLARLR IALALAERAE PAEREKLWPR LGRECDRLEA LISEILALAR LDADFGGPEP VDLNELLHRL KNDTHLDGAE QHIQVEVQHD LHLQGWPDMI ERALDNLLRN ALRFNPAGQR IDLQAIQVGD RVSLSVRDHG PGVADEHLAQ LGEPFYRAPG QSTPGHGLGL AIAKRAAERH GGNLILGNHP DGGFIATLDM PREPISPSSV
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