Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1791 |
Symbol | |
ID | 1183432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1963078 |
End bp | 1964067 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393167 |
Product | ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family |
Protein accession | NP_791616 |
Protein GI | 28868997 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCTT TTTTCAAATC CGCCCTGCCC CTTAAAGCCC TGCTGCTGGG CGCGTTGCTC AGCCTACTGG CAGGGCAGCA GGTGGTGGCT GCCGAACAGG CACCGCTGCG GGTGGCCAAT CAGAAGTCGC TGCTGAAAAC ACTGCTGCAA GTCTCCGGTG AACTCAAGGA TGTGCCTTAC GAGATTCAGT TTTCGGAGTT TCCTTCCGCC GCACCGCTGG GTGAGGCGCT GAATGCTGGC GCGGTGGACA TCGGTGCGCT GGGCGATGCA CCTTATGTGT TCGCGCTCGG CGCCGGTGCG CCACTGAAAG TGGTCAGCAT CACCCACGCT CAGGGCCGCT TCACCACGGC GGTGCTGGTG CCCAAAGATT CGCCGATCAA GACCGTGGCC GATCTCAAGG GCAAACGTAT CGTCACCGGG CGCGGCTCCA TCGGCCATTA CCTGGCGATT CGCGCCCTGC ACCAAGCAGG TCTGAAAACC AGCGACGTGA CCTTCATCAA TATGCTGCCC AGCGAATCAC GCCTGCTGCT GGACAGCGGC GACGCCGATG CCTGGGCAAC CTGGGACCCT TACACCACGA TTTCCATCAC CCAGAGCGAC GCACGCGTAC TGGTCAGTGG CAGCGAACTG CTGAGCAATC ACCTGTACCT GGCGGCAACC AGCAAAGCCA TCGAAAGCAA ACGCGCTCAG CTGGACGATT TTGTGGCCAG GGTCGAGCGC GCCTTCAATT GGTCCAACGC CCATCCGGAA GAATACGCAG CCGCTCAAGC GAAGGTCACC GGCCTGCCGC TGGCGGTGCA TCTGGCAGTG GCCAACGCGA CGAAGATGCA GCGCACGCCG ATTGACGATC AGATCATCCA GGGCCTGCAA AACACCGCTG ACACCTATCT GGCTGAGGGC ATCCTGACCA GAAAAATCGA TGTTTCAACA GGCTTCGACA AGCGCTTCAA CGCTTCGCGC GCAGAGATTG CTCAGGCCGC CGCTCGATAA
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Protein sequence | MLPFFKSALP LKALLLGALL SLLAGQQVVA AEQAPLRVAN QKSLLKTLLQ VSGELKDVPY EIQFSEFPSA APLGEALNAG AVDIGALGDA PYVFALGAGA PLKVVSITHA QGRFTTAVLV PKDSPIKTVA DLKGKRIVTG RGSIGHYLAI RALHQAGLKT SDVTFINMLP SESRLLLDSG DADAWATWDP YTTISITQSD ARVLVSGSEL LSNHLYLAAT SKAIESKRAQ LDDFVARVER AFNWSNAHPE EYAAAQAKVT GLPLAVHLAV ANATKMQRTP IDDQIIQGLQ NTADTYLAEG ILTRKIDVST GFDKRFNASR AEIAQAAAR
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