| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1787 |
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| Symbol | |
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| ID | 1183428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1957524 |
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| End bp | 1958429 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393163 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791612 |
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| Protein GI | 28868993 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTT TTGAAGACAT GCGTATTTTC TGTCAGGTCA TGGAGTCCGG CAGCTTCACG
GCGGCATCCG ACAAACTGGG TCTGTCCAAG CAGTTCGTCA GCCGCCGTCT GATGCAGCTG
GAAGAGCGAC TCGGCGTGCG CCTGCTCAAC CGCTCGACGC GGCGTCTGGA TGTCACGCCG
CTGGGCCAGA GCTACTACGA ATCGGCCCTG CGTCTGCTGG CCGAAGTCGA ACAGGTCGAG
CAGGGCATCA CCGGGCAGAA CAGCGAGCCG CGCGGCACAT TACGCCTGAG TGCGCCGTTG
TCGTTTGCCG TGGCGCATCT GGGGTGTCTG CTGCCGGTGT TTTTGCAGCG CTACCGTGAC
GTGGCGGTGG AAGTGGACCT GAGCGATCGG CCGGTGGATG TGATCAGCGA AGGCTACGAT
CTGGTGCTGC GCATCGGTGT ACTGGAAGAT TCCAGCCTGA TCGCCCGGCG CATCGCCTCG
ATTGATAGGG TCTACTGCGC CAGCCCCACC TACCTGGCCG AGCGGGGCAC GCCGCAACAG
CCTGAAGACC TGCACAGTCA TGAGTGCCTG CCCTATGGCC ACAGCCGTCA TGTGCAGTGG
CGTTTTCAGG GCACTGGCAA GCCGGTCAGC CTGAACGTCA GCGGCAGGAT GCGGGCCAAC
AACGGCGAGC TGCTCAAGGA CGCCGCCCTG GCGGGGCTGG GTATCACCTA TTTGCCGACG
TTCATCGTTG GCGATGCGTT GCGCGCTGGC AGTCTGGTTC GTGTACTGGA TGAACTGCGC
CCCGAGCCGT TGACCCTCTC TGCCGTTTAT CCGCAGCATC GCCAAGCCTC GCGACCGGTG
CAGGCGTTTA TCGAGTTTCT GCGTGAGCGA CTGGACTCGA CGATCGAACC GGGTGATCGG
CAATAG
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| Protein sequence | MNPFEDMRIF CQVMESGSFT AASDKLGLSK QFVSRRLMQL EERLGVRLLN RSTRRLDVTP
LGQSYYESAL RLLAEVEQVE QGITGQNSEP RGTLRLSAPL SFAVAHLGCL LPVFLQRYRD
VAVEVDLSDR PVDVISEGYD LVLRIGVLED SSLIARRIAS IDRVYCASPT YLAERGTPQQ
PEDLHSHECL PYGHSRHVQW RFQGTGKPVS LNVSGRMRAN NGELLKDAAL AGLGITYLPT
FIVGDALRAG SLVRVLDELR PEPLTLSAVY PQHRQASRPV QAFIEFLRER LDSTIEPGDR
Q
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