Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1779 |
Symbol | |
ID | 1183416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1948745 |
End bp | 1949956 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393151 |
Product | aminotransferase, classes I and II |
Protein accession | NP_791604 |
Protein GI | 28868985 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTCA ACAAATCGAA CAAGCTCGCA AACGTCTGCT ACGACATTCG CGGGCCAGTG CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCATCGCA TCCTCAAGCT GAATATCGGC AACCCGGCAC CGTTTGGTTT CGAGGCGCCG GACGAAATCC TGCAGGACGT GATCCGCAAC CTGCCGACCG CTCAGGGCTA CAGCGACTCC AAGGGCCTGT TCAGCGCCCG CAAGGCGGTC ATGCAGTACT ACCAGCAGAA GCAGGTCGAA GGTGTCGGCA TCGAAGACAT CTACCTGGGC AACGGCGTTT CCGAGCTGAT CGTGATGTCG ATGCAGGCGC TGCTAAATAA CGGCGACGAA GTGCTGGTTC CGGCACCCGA TTACCCATTG TGGACCGCCG CAGTTGCGCT GTCCGGTGGC AGCCCGGTGC ATTATCTGTG CGACGAGCAG GCCAACTGGT GGCCTGACCT TGAAGACATC AAGGCCAAGA TCACGCCGAA CACCAAGGCC ATGGTCATCA TCAACCCGAA CAACCCCACC GGTGCGGTGT ATTCCCGCGA AGTGCTGCTG GGCATGCTGG AGCTGGCCCG TCAGCACAAC CTGGTGGTGT TCTCCGACGA AATATACGAC AAAATCCTGT ATGACGACGC CGTGCATATC TGCACCGCCT CGCTGGCGCC GGACCTGCTG TGCCTGACCT TCAACGGCTT GTCGAAATCG TACCGCGTTG CGGGCTTCCG CTCGGGCTGG ATCGCCATTT CCGGGCCGAA ACACAACGCG CAGAGCTACA TCGAAGGCAT CGACATTCTG GCCAACATGC GCCTGTGCGC CAACGTGCCT AGCCAGCACG CCATCCAGAC CGCGCTGGGC GGCTACCAGA GCATCAATGA CCTGATCCTG CCACCAGGTC GCCTGCTGGA GCAGCGCAAC CGCACCTGGG AGTTGCTCAA CGACATTCCC GGCGTGAGCT GCGTCAAGCC GATGGGCGCG CTGTATGCGT TCCCGCGCAT CGACCCGAAG GTCTGCCCGA TCTTCAACGA CGAGAAGTTT GTGCTCGACC TGCTGCTCTC GGAAAAACTG CTGGTGGTTC AGGGCACTGC GTTCAACTGG CCTTATCCTG ACCACTTCCG CGTGGTGACC CTGCCTCGGG TCGACGAGCT GGAGCAGGCC ATTGGCCGCA TCGGCAACTT CCTCAAGGGT TATCGTCAGT AA
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Protein sequence | MQFNKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVGIEDIYLG NGVSELIVMS MQALLNNGDE VLVPAPDYPL WTAAVALSGG SPVHYLCDEQ ANWWPDLEDI KAKITPNTKA MVIINPNNPT GAVYSREVLL GMLELARQHN LVVFSDEIYD KILYDDAVHI CTASLAPDLL CLTFNGLSKS YRVAGFRSGW IAISGPKHNA QSYIEGIDIL ANMRLCANVP SQHAIQTALG GYQSINDLIL PPGRLLEQRN RTWELLNDIP GVSCVKPMGA LYAFPRIDPK VCPIFNDEKF VLDLLLSEKL LVVQGTAFNW PYPDHFRVVT LPRVDELEQA IGRIGNFLKG YRQ
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