| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1778 |
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| Symbol | htpX |
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| ID | 1183415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1947589 |
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| End bp | 1948476 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393150 |
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| Product | heat shock protein HtpX |
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| Protein accession | NP_791603 |
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| Protein GI | 28868984 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.463341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA TTTTGCTGTT TTTGGCCACT AACCTTGCGG TCGTGCTGAT TGCCAGCATC
ACCCTGAGCC TTTTTGGCTT CAATGGGTTC ATGGCGGCCA ACGGGGTTGA TCTGAACCTC
AATCAGCTGC TGGTCTTCTG CGCTGTGTTC GGTTTCGCCG GCTCGCTGTT CTCGCTGTTC
ATCTCCAAGT GGATGGCGAA AATGAGCACC GGTACTCAGA TCATCACCCA GCCACGTACT
CGCCATGAGC AATGGTTACT GCAGACCGTT GAACAACTGT CCCGCGATGC GGGCATCAAG
ATGCCGGAAG TCGGTATTTT TCCGGCGTAT GAAGCCAATG CGTTCGCTAC CGGCTGGAAC
AAGAACGACG CACTGGTTGC CGTCAGCCAG GGCCTGCTCG AGCGGTTCTC GCCAGATGAG
GTAAAGGCTG TACTGGCGCA CGAAATCGGC CATGTTGCCA ACGGCGACAT GGTCACGCTG
GCCCTGGTGC AGGGTGTGGT GAACACCTTT GTGATGTTCT TCGCCCGTAT CATCGGCAAT
TTTGTCGACA AAGTGATCTT CAAGACCGAG AACGGTCAGG GTATCGCCTA CTACATCACG
ACGATCTTTG CCGAGCTGGT ACTGGGCTTT CTGGCCAGTG CGATTGTCAT GTGGTTCTCG
CGCAAACGCG AATTCCGCGC TGACGATGCC GGTGCACGAC TGGCCGGTAC GGACGCGATG
ATCGGTGCGC TGCAACGCTT GCGCTCGGAA CAGGGCGTAC CGGTGAACAT GCCTGACAGC
CTGACGGCGT TCGGTATCAA CGCCGGCCTC AAGAAAGGCC TCGCCGGCCT GTTCATGAGC
CACCCGCCGC TGGAACAACG CATCGAGGCA CTGCGCCGCC GCGGTTGA
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| Protein sequence | MMRILLFLAT NLAVVLIASI TLSLFGFNGF MAANGVDLNL NQLLVFCAVF GFAGSLFSLF
ISKWMAKMST GTQIITQPRT RHEQWLLQTV EQLSRDAGIK MPEVGIFPAY EANAFATGWN
KNDALVAVSQ GLLERFSPDE VKAVLAHEIG HVANGDMVTL ALVQGVVNTF VMFFARIIGN
FVDKVIFKTE NGQGIAYYIT TIFAELVLGF LASAIVMWFS RKREFRADDA GARLAGTDAM
IGALQRLRSE QGVPVNMPDS LTAFGINAGL KKGLAGLFMS HPPLEQRIEA LRRRG
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