Gene PSPTO_1765 details

Gene Information

• Locus tag: PSPTO_1765
• Symbol: efp
• ID: 1183402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1936301
• End bp: 1936870
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637393137
• Product: translation elongation factor P
• Protein accession: NP_791590
• Protein GI: 28868971
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTG GTAAAGAGCT GAAACCCGGT ACTGTGATCC GTCTCGAAAA CGATCCTTGG 
CTGGTTCAGA AAGCTGAATT CACCAAATCC GGTCGTAACA GCGCGATCAT GAAGACCAAG 
CTGAAAAACC TGCTGACCGG TTACAAGACC GAGATCGTTT ACAGTGCTGA CGACAAGCTG 
GACGACGTGA TCCTGGATCG CAAGGAAGCC ACCCTGTCTT TCATCAGCGG TGACACCTAC 
ACGTTCATGG ACACCACTGA TTACACCATG TACGAGCTGA ACGCCGAAGA CATCGAAAGC 
GTTCTGCCAT TCGTTGAAGA AGGCATGACC GACGTCTGCG AAGCCGTGTT CTTCGACGAG 
CGTCTGGTTT CCGTGGAGCT GCCGACCACT ATCGTGCGTC AGGTCGACTA CACCGAAGGT 
TCCGCTCGCG GCGACACGTC GGGCAAGGTC ATGAAGCCTG CCAAGCTGAA AAACGGCACC 
GAGCTGAGCG TTGCTGACTT CATCGAAATC GGCGACATGA TCGAGATCGA TACCCGTGAA 
GGCGGTTCCT ACAAAGGCCG TGCGAAGTAA 

 

Protein sequence

MKTGKELKPG TVIRLENDPW LVQKAEFTKS GRNSAIMKTK LKNLLTGYKT EIVYSADDKL 
DDVILDRKEA TLSFISGDTY TFMDTTDYTM YELNAEDIES VLPFVEEGMT DVCEAVFFDE 
RLVSVELPTT IVRQVDYTEG SARGDTSGKV MKPAKLKNGT ELSVADFIEI GDMIEIDTRE 
GGSYKGRAK