Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1764 |
Symbol | |
ID | 1183401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1935065 |
End bp | 1936201 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393136 |
Product | hypothetical protein |
Protein accession | NP_791589 |
Protein GI | 28868970 |
COG category | [S] Function unknown |
COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.862195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCT CTTGGGACAT TTTTTGCAGC GTAGTCGACA ACTACGGTGA TGCGGGTGTG ACCTGGCGTC TGGCACGCCA ACTGGTTGCC GAACATGACG TGCAGGTGCG CTTGTGGATC GATGACCTGG CGGCCTTTGT TCGCCTGTGT CCAGACGCCG ATCCTTGCGC CTCGCAGCAA TTGCGTGAGG GCGTCAGCGT CTGCCGTTGG CCCGCAGACT GGGTCAGCAG CACCGTGCCC GACGTGGTTA TCGAAGCCTT CGCCTGCCGA CTGCCGACGT CTTACACCGA ATCAATGCTG CAGCGCTCGC CCAGGCCGCT GTGGCTGAAC CTTGAGTACC TCAGCGCCGA AGACTGGGTC TCGGGTTGCC ACGGTTTGCC TTCGCCGCAA ATGAACGGCT TGAAAAAGTT TTTTTTCTTC CCCGGTTTTG CGGACACCAC CGGTGGCCTG TTGCGCGAAA GAAACCTGAT CGGGCAACGT CAGGCGTTTC AGCAGGACAA GGCGTTACAG CAAGCGTTTC TGCAGGAACT GAACGTCGAG CCGTTGGCCG GCGCACGCCT GATCTCGGTG TTTGCCTATG AGACCCCGCG ACTGGACAGC TGGCTCGACG CGCTGGCCAG CGACAGCCGC CCGACCCACC TGCTGGTGCC GGAAGGGCGC ATTCTGGCGG ATGTGCAGCG CTGGCTCGGT AGTGAGGGGC AATTGCACGC CGGAACGGTG CAGGCAAGCG GCGCGTTGAC GGTCCAGGTC TTACCGTTCA TCCGACAGGA GCGCTACGAT CAACTGCTCT GGAGCTGCGA TTTCAACGTG GTGCGCGGCG AGGACTCGTT CGTGCGTGCC CAGTGGGCAG GGCGGCCGAT GCTTTGGCAC ATCTATCAGC AGGAAGAAGA CGCCCATCTG CCCAAGCTTG ATGCCTTTCT GGCGCTCTAT CTGGCGCGCC TTGCGCCTGA GGCGGGGCAG GCAGTGAATC AGTTCTGGCA AAGCTGGAAC GCCGGCAGCG ACCTGAGCGA AAGCTGGCAG GCACTCACCG AACACTGGGC GCAAATCGAA AAACACGCCG AACGCTGGTG CCAGCAACAA GCCGCACAGA CTGATCTTGC CACGGCGCTG GTGCAGTTTT ATGGAAATTC GCTATGA
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Protein sequence | MKPSWDIFCS VVDNYGDAGV TWRLARQLVA EHDVQVRLWI DDLAAFVRLC PDADPCASQQ LREGVSVCRW PADWVSSTVP DVVIEAFACR LPTSYTESML QRSPRPLWLN LEYLSAEDWV SGCHGLPSPQ MNGLKKFFFF PGFADTTGGL LRERNLIGQR QAFQQDKALQ QAFLQELNVE PLAGARLISV FAYETPRLDS WLDALASDSR PTHLLVPEGR ILADVQRWLG SEGQLHAGTV QASGALTVQV LPFIRQERYD QLLWSCDFNV VRGEDSFVRA QWAGRPMLWH IYQQEEDAHL PKLDAFLALY LARLAPEAGQ AVNQFWQSWN AGSDLSESWQ ALTEHWAQIE KHAERWCQQQ AAQTDLATAL VQFYGNSL
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