| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1743 |
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| Symbol | |
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| ID | 1183380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1910654 |
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| End bp | 1911985 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393115 |
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| Product | hydrolase, Atz/Trz family |
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| Protein accession | NP_791568 |
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| Protein GI | 28868949 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAACG CTACAGCACC GCTCGACCTT TTGCTCCTGC CCGCCTGGCT GGTGCCGGTC
GAGCCCGCAG GCGTTGTGCT CAAGGACCAC GGTATCGGCA TTCGCGACGG CTGTATCGTC
TACATCGGCC CGCGCGCCGA GGCGTTGCGG CAAAACGCCT CGCAGGTGCA GGAACTGCCC
GGCATGCTGC TCAGCCCCGG CCTGATCAAC GCCCACGGCC ATGCGGCAAT GACGCTGTTT
CGTGGTCTGG CCGATGACCT GCCGCTGATG AGCTGGCTGC AGGACCACAT CTGGCCCGCC
GAAAGCCGAT GGGTCGATGA AGACTTCGTG CGCGACGGCA CCGATCTGGC CATCGCCGAG
CAGCTCAAAG GCGGCATCAC CTGTTTCTCG GACATGTATT TCTACCCCAA GGTTGCCGCC
GAGCGCGTTC ACCTCAGCGG CATGCGCGCG CAAATCACTG TGCCGGTGCT GGATTTTCCG
ATTCCGGGCG CTCATAACAC CGATGAAGCG CTGCACAACG GCATCGAACT GTTCAACGAC
CTGGCCCATC ACCCGCGCAT CAAGATCGCC TTTGGCCCCC ACGCGCCCTA CACCGTAGGC
GACGAGAACC TGGAAAAGGT CCGGGTCATC GCCGACGAAC TGGACGCCAT GATCCAGATG
CACGTCCACG AGACCGCCTT TGAAGTCGAA CAAGCCGTCG AACAGCATCA GGAACGCCCA
CTTGCCCGCT TGAATCGTCT GGGCATGCTC GGCCCGCGCT TTCAGGCCGT ACACATGACC
CAGATCAGCG ACGCCGACCT GGCCTTGCTG GTGGAAAGCA ACACCAGCAT CATTCATTGC
CCCGAATCCA ATCTCAAGCT GGCCAGCGGC TTCTGCCCGG TTGAACGACT GTGGCAGGCG
GGTGTGAACG TTGCAGTGGG CACCGATGGC GCGGCCAGCA ACAACGACCT CGACCTGCTC
GGCGAAACCC GCACCGCCGC CCTGCTCGCC AAGGCTGTCG CCGGTTCGGC CACGGCGCTG
GATGCTCATC GGGCATTGCG CATGGCCACC CTGAACGGCG CTCGTGCACT GGGCATCCAG
GCGGAAGCCG GCTCGTTGGA ACTCGGCAAG GCCGCAGACA TGGTCGCCTT CGACCTGTCC
AGGCTGGCCC AGCAACCGAT CTACGATCCG GTATCTCAGC TTATATATGC CACTGGCCGC
GATTGCGTGA GTCACGTCTG GGTGGCCGGC AAACAGTTGC TCGACAACGG TCGCCTGACC
CGAATGGACG AACACGCACT GCGCGATACC GCCATCGCCT GGGGTCAGCG TATTTCCGGT
AAAGCCGAAT AA
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| Protein sequence | MPNATAPLDL LLLPAWLVPV EPAGVVLKDH GIGIRDGCIV YIGPRAEALR QNASQVQELP
GMLLSPGLIN AHGHAAMTLF RGLADDLPLM SWLQDHIWPA ESRWVDEDFV RDGTDLAIAE
QLKGGITCFS DMYFYPKVAA ERVHLSGMRA QITVPVLDFP IPGAHNTDEA LHNGIELFND
LAHHPRIKIA FGPHAPYTVG DENLEKVRVI ADELDAMIQM HVHETAFEVE QAVEQHQERP
LARLNRLGML GPRFQAVHMT QISDADLALL VESNTSIIHC PESNLKLASG FCPVERLWQA
GVNVAVGTDG AASNNDLDLL GETRTAALLA KAVAGSATAL DAHRALRMAT LNGARALGIQ
AEAGSLELGK AADMVAFDLS RLAQQPIYDP VSQLIYATGR DCVSHVWVAG KQLLDNGRLT
RMDEHALRDT AIAWGQRISG KAE
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