Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1735 |
Symbol | |
ID | 1183372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1901376 |
End bp | 1902008 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637393107 |
Product | hypothetical protein |
Protein accession | NP_791560 |
Protein GI | 28868941 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3531] Predicted protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.824558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC GCCTGATCTA TGTCATGGAC CCCATGTGTT CGTGGTGCTG GGGCTTCGCT CCGGTTGCCG AAGCGCTGGT CGCACAGGCT CGGGCGGCGG GTGTGCCGTT GCATCTGGTG ATGGGCGGTC TGCGCGCTGA AAGTGCTGCG CTGGAACCGG CCAAGCGCCG TTACATTCTT GAACACTGGC AGGCGGTCGA AGAGGCCACC GGCCAGACTT TCCGTCTTCA AGGCGCGCTG CCGGAAGGCT TTGTCTATGA CACGACCCCG GCCTGTCTGG CGGTGACTGC CGCCCGGCAT CTCGACCCGG ACCGCGCCTG GGCGCTGGTT GGGCTGATCC AGCGGGCTTT TTACAGTGAA GGCCGCGACG TGACGCGCCC GTCGTTGCTG GCTGAGCTGG CCGAACAGAC TGGCCTGTCA CGTCAGGCGT TTGCCGATGA ATTTGACAGC CCCGAGCGGC AGGCAGCAAC GGCGGCAGAT TTCGCCTGGG CGCAGGATCT GGGCATTGCC GGGTTTCCGA CCCTGCTCGC CGAGCGCAAT GGGCAACTGG CGCTGCTGAC CAATGGTTAT CAACCACTTG CCAGTCTTGC TCCCCTGCTG GGCCGATGGC TGGAGCGTGG CGCCAGTGCG TGA
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Protein sequence | MSSRLIYVMD PMCSWCWGFA PVAEALVAQA RAAGVPLHLV MGGLRAESAA LEPAKRRYIL EHWQAVEEAT GQTFRLQGAL PEGFVYDTTP ACLAVTAARH LDPDRAWALV GLIQRAFYSE GRDVTRPSLL AELAEQTGLS RQAFADEFDS PERQAATAAD FAWAQDLGIA GFPTLLAERN GQLALLTNGY QPLASLAPLL GRWLERGASA
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