Gene PSPTO_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1716 
Symbol 
ID1183353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1885961 
End bp1886533 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content64% 
IMG OID637393088 
Productalpha-ribazole-5'-phosphate phosphatase, putative 
Protein accessionNP_791541 
Protein GI28868922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID[TIGR03162] alpha-ribazole phosphatase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.507425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGC GTCTGGACCT GCTGCGCCAC GGTGAAACCG AACTGGGCGG CGGCCTGCGC 
GGTAGCCTGG ATGATGCGCT GACTGATCTC GGCTGGCAGC AAATGCGTTC GGCTGTTATT 
GACGGCGGCC CCTGGGACCG GATTGTCAGC TCGCCGTTGC AGCGCTGCGC ACGGTTTTCC 
GAAGAACTGG CGCAACGCCT GTCGTTGCCC TTGCAACTGG AGCCGGGTTT GCAGGAGCTG 
CATTTCGGTG ACTGGGAAGG CCACAGCCCT GCGCAACTGA TGGACACCGA TGCTGAAGGT 
CTGGGGTTGT TCTGGGCTGA CCCGTATACG TTCACGCCGC CCAATGGCGA GCCGGTGATC 
GATTTTTCAG CGCGGGTGCG CAATGCTGTG CAGCGCTTGC ATCAGGCGTA TGACGGTGAG 
CGCGTTCTGG TGGTCAGTCA CGGTGGCGTC ATGCGCCTGT TGCTGGCTCA GGCGCGCGGC 
TTGCCGCGTG AGCAGTTGTT GCAGGTGGTG GTCGGTCACG GCGCGCTGCT GTCGATTCAG 
GTCGCCGCTG GCGGTCTGCT CACGGAGGTC TGA
 
Protein sequence
MSVRLDLLRH GETELGGGLR GSLDDALTDL GWQQMRSAVI DGGPWDRIVS SPLQRCARFS 
EELAQRLSLP LQLEPGLQEL HFGDWEGHSP AQLMDTDAEG LGLFWADPYT FTPPNGEPVI 
DFSARVRNAV QRLHQAYDGE RVLVVSHGGV MRLLLAQARG LPREQLLQVV VGHGALLSIQ 
VAAGGLLTEV