Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1686 |
Symbol | wrbA |
ID | 1183323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1855816 |
End bp | 1856421 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637393058 |
Product | trp repressor binding protein |
Protein accession | NP_791511 |
Protein GI | 28868892 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACAC CTTATATTCT GGTTCTGTAT TACAGCCGTA ATGGCTCAAC CAGCGAAATG GCCCGGCAGA TCGCCCGCGG TATCGAGCTG GGCGGCATGG AAGCGCGACT GCGCACCGTG CCCGCCGTTT CTGCCGACCA CGAAGCGAGC GCCCCGGAGA TCCCGGAAAA CGGCGCGCTG TACGCAAGCC TGGATGACCT GAAAAACTGT TCCGGCCTGG CACTCGGCAG CCCGACCCGT TTTGGCAACA TGGCCGCGCC GCTGAAATAC TTTCTGGACG GCACCAGCAA CCTGTGGCTG ACCGGCGCAC TGGTCGGCAA ACCGGCTGGC GTCTTCACCT CCACCGCCAG CCTGCACGGT GGCCAGGAAA CCACACTGAT GTCGATGCTG CTGCCGCTGC TGCACCACGG CATGCTGATC ATGGGCCTGC CGTACAGCGA ATCGGCATTG CTGGAAACCG CTGGCGGCGG CACCCCCTAT GGCGCCAGCC ATCACGCCGG GGCCGACGGC AAACGCGCGC TGGACCGGCA CGAAACCGAC CTGTGCCGCG CGCTGGGCCA GCGCCTGGCG AAAACCGCGC TGCGCCTGGA CGCACCGCGT AGCTGA
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Protein sequence | MSTPYILVLY YSRNGSTSEM ARQIARGIEL GGMEARLRTV PAVSADHEAS APEIPENGAL YASLDDLKNC SGLALGSPTR FGNMAAPLKY FLDGTSNLWL TGALVGKPAG VFTSTASLHG GQETTLMSML LPLLHHGMLI MGLPYSESAL LETAGGGTPY GASHHAGADG KRALDRHETD LCRALGQRLA KTALRLDAPR S
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