Gene PSPTO_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1686 
SymbolwrbA 
ID1183323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1855816 
End bp1856421 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID637393058 
Producttrp repressor binding protein 
Protein accessionNP_791511 
Protein GI28868892 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID[TIGR01755] NAD(P)H:quinone oxidoreductase, type IV 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACAC CTTATATTCT GGTTCTGTAT TACAGCCGTA ATGGCTCAAC CAGCGAAATG 
GCCCGGCAGA TCGCCCGCGG TATCGAGCTG GGCGGCATGG AAGCGCGACT GCGCACCGTG
CCCGCCGTTT CTGCCGACCA CGAAGCGAGC GCCCCGGAGA TCCCGGAAAA CGGCGCGCTG
TACGCAAGCC TGGATGACCT GAAAAACTGT TCCGGCCTGG CACTCGGCAG CCCGACCCGT
TTTGGCAACA TGGCCGCGCC GCTGAAATAC TTTCTGGACG GCACCAGCAA CCTGTGGCTG
ACCGGCGCAC TGGTCGGCAA ACCGGCTGGC GTCTTCACCT CCACCGCCAG CCTGCACGGT
GGCCAGGAAA CCACACTGAT GTCGATGCTG CTGCCGCTGC TGCACCACGG CATGCTGATC
ATGGGCCTGC CGTACAGCGA ATCGGCATTG CTGGAAACCG CTGGCGGCGG CACCCCCTAT
GGCGCCAGCC ATCACGCCGG GGCCGACGGC AAACGCGCGC TGGACCGGCA CGAAACCGAC
CTGTGCCGCG CGCTGGGCCA GCGCCTGGCG AAAACCGCGC TGCGCCTGGA CGCACCGCGT
AGCTGA
 
Protein sequence
MSTPYILVLY YSRNGSTSEM ARQIARGIEL GGMEARLRTV PAVSADHEAS APEIPENGAL 
YASLDDLKNC SGLALGSPTR FGNMAAPLKY FLDGTSNLWL TGALVGKPAG VFTSTASLHG
GQETTLMSML LPLLHHGMLI MGLPYSESAL LETAGGGTPY GASHHAGADG KRALDRHETD
LCRALGQRLA KTALRLDAPR S