| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1671 |
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| Symbol | nrdA |
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| ID | 1183308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1840004 |
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| End bp | 1842916 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393043 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | NP_791496 |
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| Protein GI | 28868877 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAG ACACAACTCG CGAGAACTCG CCGACCGGCG CGCCGCAGGC AAGCCAGGCC
CAACAGGATC TGTCTGCCAC GGCCCCCGGT CAACTGCGCG TGATCAAGCG TAACGGTACT
GTCGTCCCTT ACACGGATGA CAAGATCACC GTCGCCATCA CCAAGGCGTT TCTTGCAGTT
GAGGGCGGCA ATGCTGCTGC CTCGTCGCGC ATCCACGACA CCGTTGCCCG CCTGACCGAA
CAGGTCAGCG CCACGTTCAA GCGTCGCATG CCTTCGGGCG GCACCATCCA CATCGAAGAA
ATCCAGGATC AGGTCGAACT GGCCCTGATG CGTGCCGGCG AACAGAAAGT CGCTCGCGAC
TACGTGATTT ACCGTGATTC GCGTGCCAAG GAGCGTGCCG GTCGCGCCCC CGAAGATCAG
GTTCAGGCTC ACCCGTCGAT CCGCATCACC CTCGCCGACG GCAGCTTTGC GCCGCTGGAC
ATGGGTCGCC TGAACACCAT CGTCACCGAA GCGTGTGAAG GCCTGGCTGA AGTCGACGCC
GACCTGATCC AGACCGAAAC CCTGAAAAAC CTGTACGACG GCGTGGCGCT GAAAGACGTC
AACACCGCAC TGGTCATGAC CGCGCGTACC CTGGTCGAGC GCGAGCCGAA CTACTCGTTC
GTCACCGCCC GCCTGCTGAT GGACACCCTG CGCGCCGAAG GCCTGGGCTT CCTCGGTGTC
GCCGACAGCG CCACCCACCA CGAAATGGCC GACCTGTACG CCAAGGCGCT GCCTGCCTAC
GTCGCCACCG GTATCAAGTT CGAACTGCTC AACCCTGTGC TGGCTGAATT CGACCTCGAA
AAACTCGGCA AGGCCATCAA CCACGAGCGC GATCAGCAGT TCACCTACCT GGGCCTGCAA
ACCCTGTACG ACCGTTACTT CATCCACAAG GATGGCGTGC GTTTCGAACT GCCGCAGATC
TTCTTCATGC GCGTGGCCAT GGGCCTGGCA ATCGAAGAGA AAGCCCGTGA AGACCGCGCC
ATCGAGTTCT ACAATCTGCT GTCGTCGTTC GACTACATGT CGTCGACCCC GACACTGTTC
AACGCCGGCA CCCTGCGTCC ACAGCTGTCC AGCTGCTACC TGACCACCGT GCCGGATGAC
CTGTCGGGCA TCTACCACGC GATCCACGAC AACGCCATGC TGTCCAAATT CGCAGGCGGC
CTGGGCAACG ACTGGACACC GGTTCGTGCG CTGGGCTCGT ACATCAAGGG CACCAACGGC
AAGTCGCAAG GCGTCGTGCC GTTCCTCAAA GTGGTCAACG ACACCGCCGT TGCGGTCAAC
CAGGGCGGCA AGCGCAAGGG CGCTGTCTGT GCCTACCTGG AAACCTGGCA CATGGACATC
GAAGAGTTCA TCGAGCTGCG CAAGAACACC GGTGATGATC GTCGTCGTAC CCACGACATG
AACACCGCCA ACTGGATCCC TGACCTGTTC ATGAAGCGCG TCTTCGACGA CGGCCCGTGG
ACCCTGTTCT CGCCTTCCGA AGTGCCGGAC CTGCACGACC TGACCGGCAA GGCCTTCCAG
GAGCGTTACG AGTACTACGA AGCGCTGACC GAATACCCGG GCAAGGTGAA ACTGTTCAAG
ACCATCCAGG CCAAGGATCT GTGGCGCAAG ATGCTCTCGA TGCTGTTCGA AACCGGCCAC
CCCTGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGCAGCC CGCAGCAGCA CGTGGGCGTG
GTTCACAGCT CGAACCTGTG CACCGAGATC ACCCTGAACA CCAACAAGGA CGAGATCGCG
GTCTGCAACC TGGGCTCGAT CAACCTGCCG AACCACATCG TCAACGGCAA GCTGGACACC
GACAAGCTCA AGCGCACCAT CGATGTAGCC GTTCGCATGC TCGATAACGT CATCGACATC
AACTACTACT CCGTGCCGCA GGCCCGCAAC TCCAACCTGC GCCACCGTCC GGTCGGCCTG
GGCATCATGG GCTTCCAGGA CGCGCTGTAC CTGCAGCACA TTCCTTATGG TTCCGATGCT
GCCGTGCAGT TTGCCGACAG CTCGATGGAA GCGGTCAGCT ACTACGCCAT TCAGGCGTCC
TGCGACCTGG CTGACGAGCG CGGCGCCTAC GAGACGTTCC AGGGTTCGTT GTGGTCCCAG
GGCATTCTGC CGCTGGACTC GCAACAGATC CTCATCGAGC AGCGTGGCCA GAAGTACATC
GATGTCGACC TGAAAGAATC CCTGGACTGG GCGCCGGTTC GTGCCCGTGT GCAGAAAGGC
ATTCGTAACT CGAACATCAT GGCCATCGCA CCGACCGCCA CCATTGCCAA CATCACGGGT
GTGTCGCAGT CGATCGAGCC GACCTACCAG AACCTGTACG TGAAATCGAA CCTGTCCGGC
GAATTCACCG TGATCAACCC GTACCTGGTT CGCGACCTCA AGGCCCGCGA CCTGTGGGAC
TCGGTCATGA TCAACGACCT CAAGTACTAC GACGGTTCGG TGCAACAGAT CGAGCGCATC
CCGCAGGAGC TCAAAGAGCT CTACGCGACC GCCTTCGAAG TGGACACCAA GTGGATCGTC
GACGCGGCAA GCCGTCGTCA GAAGTGGATC GACCAGGCTC AGTCGCTGAA CCTGTACATC
GCTGGCGCTT CGGGCAAGAA GCTGGACGTG ACCTACCGCA TGGCCTGGTA CCGTGGTCTG
AAAACCACTT ACTACCTCCG TGCCCTGGCC GCGACCAGCA CCGAGAAGTC CACCGTCAAC
ACCGGCAAGC TCAACGCCGT ATCGAGCGGC GGCCACGGCC CGGACGACTC GGCGATCACC
GCCCCTCGCC CGACCGAAGC CGCACCTGCC GGCCCGGCCC CGGTGCCAAA GGCTTGCGCG
ATTGACGAGC CGGATTGTGA GGCTTGCCAG TAA
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| Protein sequence | MQTDTTRENS PTGAPQASQA QQDLSATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGNAAASSR IHDTVARLTE QVSATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYRDSRAK ERAGRAPEDQ VQAHPSIRIT LADGSFAPLD MGRLNTIVTE ACEGLAEVDA
DLIQTETLKN LYDGVALKDV NTALVMTART LVEREPNYSF VTARLLMDTL RAEGLGFLGV
ADSATHHEMA DLYAKALPAY VATGIKFELL NPVLAEFDLE KLGKAINHER DQQFTYLGLQ
TLYDRYFIHK DGVRFELPQI FFMRVAMGLA IEEKAREDRA IEFYNLLSSF DYMSSTPTLF
NAGTLRPQLS SCYLTTVPDD LSGIYHAIHD NAMLSKFAGG LGNDWTPVRA LGSYIKGTNG
KSQGVVPFLK VVNDTAVAVN QGGKRKGAVC AYLETWHMDI EEFIELRKNT GDDRRRTHDM
NTANWIPDLF MKRVFDDGPW TLFSPSEVPD LHDLTGKAFQ ERYEYYEALT EYPGKVKLFK
TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSINLP NHIVNGKLDT DKLKRTIDVA VRMLDNVIDI NYYSVPQARN SNLRHRPVGL
GIMGFQDALY LQHIPYGSDA AVQFADSSME AVSYYAIQAS CDLADERGAY ETFQGSLWSQ
GILPLDSQQI LIEQRGQKYI DVDLKESLDW APVRARVQKG IRNSNIMAIA PTATIANITG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKARDLWD SVMINDLKYY DGSVQQIERI
PQELKELYAT AFEVDTKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTVN TGKLNAVSSG GHGPDDSAIT APRPTEAAPA GPAPVPKACA
IDEPDCEACQ
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