Gene PSPTO_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1652 
Symbol 
ID1183289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1815904 
End bp1816479 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID637393024 
Producthypothetical protein 
Protein accessionNP_791477 
Protein GI28868858 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGCA ATCTATTCCG GGGCAGTGCT CGTCAGGCAC ACGAGGTTTT TGCCGGTTTT 
ACCCCAACCC CCTTCCAACG CCACAACCGC CAGCTCCTCG CCCTCCTCCT CGAAAACCAA 
CCTTGGTTCA GCGCCCGCGA TCTGGGTCGC ATGATCGGCT GGCCGTTGAA CGAGCGGACG 
CTGCGCAAGC TGGACACAGA CCAGCACCGA ATGATCACGC TCGACCTGCA CGGCGAAGCC 
GAGCCAGAGC TGATGGTCAG TGAGTCGGGC GCGTACGCGA TGATGGTGCA TCACTACCAC 
GCGGAGAATC GCGGGTTGCG GCAGTGGATT ACCAACGAGG TGGTGCCTGC CTTGCGAGAT 
GGGCAAGTGC CGTTTGATGA CTGTACGCCG AACCTGAGCA TGCTGCAGTG GCCGGGGTTG 
TCGGTGAGTA TGTTGCACTG GCACAGCGAG CCGTGGATAC GGTTGCGGGA TATGCCGATG 
CTGTTGGCGC ACCCGCAGAT GCAGGTTGAT GCGCGGCCGC ATCGCTTGGC GAAGTCGTGG 
TGGCGGGCGG TGTTGCCTGT TTCTCGGTTG GGTTGA
 
Protein sequence
MLSNLFRGSA RQAHEVFAGF TPTPFQRHNR QLLALLLENQ PWFSARDLGR MIGWPLNERT 
LRKLDTDQHR MITLDLHGEA EPELMVSESG AYAMMVHHYH AENRGLRQWI TNEVVPALRD 
GQVPFDDCTP NLSMLQWPGL SVSMLHWHSE PWIRLRDMPM LLAHPQMQVD ARPHRLAKSW 
WRAVLPVSRL G