| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1644 |
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| Symbol | recQ |
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| ID | 1183281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1800803 |
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| End bp | 1802932 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393016 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | NP_791469 |
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| Protein GI | 28868850 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.273045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGC AGGCACAACG CGTACTTAAA GACATCTTTG GTTACGACAG CTTTCGTGGT
CGCCAGGGTG CCATTATTGA GCGTGTAGCC AACGGCGGCG ATGCACTTGT GCTGATGCCG
ACCGGTGGCG GCAAGTCCCT GTGTTTTCAG GTGCCCGGGC TGTTGCGGGA CGGTCTCTGC
GTGGTCGTTT CGCCGCTTAT CGCGCTGATG GACGATCAGG TTGCCACCCT CGATGAGCTG
GGCGTTTCTG CCGCAGCGCT CAATTCCACT CTCAATGCCG AGCAACAGCG CGAACTGGCC
AACCGTATCC GTCTGGGCGA AGTGAAAATG CTTTACCTCG CCCCGGAGCG CCTGGTTCAG
CCGCGCATGC TGTCATTCCT GCAAAACCTG AAAATCGCCC TGTTTGCCAT CGACGAAGCG
CATTGCGTGT CGCAATGGGG GCATGACTTC CGCCCTGAAT ACCTGCAATT GGGGCAATTG
GCCGAACTGT TTCCGGATGT GCCGCGCATC GCCCTGACCG CCACGGCAGA CAAGCGTACC
CGTGAAGAAA TCGTCACGCG CCTGCACCTG CAGAACGCCG AACGCTTCTT GTCCAGCTTC
GACCGGCCAA ACATCTTTTA CCGCATCGTG CCCAAGGAAC AGCCGCGCAA ACAGCTCCTG
GCGTTCCTGT CCGAGCGGCG CAGCGATGCC GGTATCGTCT ACTGCCTGTC GCGCAAGAAA
GTCGATGAAG TGGCTGTGTT CCTCAGTGAA AACGGTTATC CCGCGTTGCC GTATCACGCC
GGCTTGCCAT CGGAAACCCG CGCCGCCAAC CAGAAACGCT TCCTTAACGA GGAAGGCCTG
ATCATGGTCG CGACCATCGC GTTCGGCATG GGCATCGACA AACCCAACGT GCGCTTCGTT
GCGCACATGG ACCTGCCCAA ATCGCTGGAA GCCTACTATC AGGAAACCGG CCGGGCAGGG
CGCGACGGCT TGCCCGCCGA TGCATGGATG GCCTACGGCC TGCAAGACGT GCTGATGCTC
AAGCAGATGT TGCAGAACTC CGAAGGCGAC GAGCGCCACA AGCGCCTGGA GCAGCACAAG
CTCGATGCCA TGCTGGCCCT TTGCGAAGAA ACCCGCTGCC GCCGTCAGAC CCTGCTGGCC
TATTTCGACG AAGACATGCC CAACCCCTGC GGGCATTGCG ACAACTGTGT CGATGGCGTG
CAAACCTGGG ACGCCACCGA GCCCGCGCGT CAGGCGTTGT CGGCCATCTA CCGCACCGGT
CAGCGCTATG GCGTCGGTCA TCTGGTCGAT GTACTGCTCG GCAAATCCAA CGACAAGGTC
CAAAGCTTCG GTCATCAGCA CCTGTCGGTG TTCGGTGTCG GCAAGGCGCG CACCGAAGCC
GAGTGGCGTT CGCTGTTCCG CCAACTGGTC GCGCGCGGCC TCGCCGACAT CGACCTTGAA
GGCTACGGCG GCCTGCGCCT GAGCGACACC TGCCGCCCGT TGCTGCGTGG CGAGGTTTCG
CTGGAACTGC GCCGCGACCT CAAACCACAA ACAACTTCAA GAAGCAGCTC CGGCAGCCCG
GCCAGCCAAC TGGTGCGTGG CGAAGAGCGC GAGCAGTGGG AAGCCCTGCG TGCCCTGCGC
CGCAAGCTGG CCGAAGAGCA CGGCGTGCCG CCTTATGTCA TTTTCCCGGA CTCGACCCTG
CTGGAAATGC TGCGCAGCAA ACCGGGTTCG ATGGCCGAGA TGGCCAAAGT GAGTGGCGTG
GGTGCGCGCA AACTGGAGCG TTACGGCGAG GCTTTCCTTG AAGTGCTCAG CGGCAAGACC
GAGGCGCCGC AAGTGGTTGC CGACATTCGC CATGAGCTGA TCAGCCTGGC GCGTGCGGGC
ATGACCCCGA CACAGATCGC CGGCCAGTTG CAGTGCTCGG AAAAGAATGT CTACACCCTG
TTGGCCGAGG CCATCGGCAA GCAGCAGTTG TCCATCGAGC AGGCGCTCGA TTTGCCGGAA
GACCTGTTGG GCGAGGTGCA GGATGCCTTT CTCGACGGCG AAGGTGAGCT GCCGCCGGTC
TCGGCGATTG CCGAGCAATT TGCCGGTCGC GTGCCGGAGG GCGTGCTGTA TTGCGTACGT
GCGGCGCTGC AATCTGAATT TGAGGTATAA
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| Protein sequence | MLEQAQRVLK DIFGYDSFRG RQGAIIERVA NGGDALVLMP TGGGKSLCFQ VPGLLRDGLC
VVVSPLIALM DDQVATLDEL GVSAAALNST LNAEQQRELA NRIRLGEVKM LYLAPERLVQ
PRMLSFLQNL KIALFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPDVPRI ALTATADKRT
REEIVTRLHL QNAERFLSSF DRPNIFYRIV PKEQPRKQLL AFLSERRSDA GIVYCLSRKK
VDEVAVFLSE NGYPALPYHA GLPSETRAAN QKRFLNEEGL IMVATIAFGM GIDKPNVRFV
AHMDLPKSLE AYYQETGRAG RDGLPADAWM AYGLQDVLML KQMLQNSEGD ERHKRLEQHK
LDAMLALCEE TRCRRQTLLA YFDEDMPNPC GHCDNCVDGV QTWDATEPAR QALSAIYRTG
QRYGVGHLVD VLLGKSNDKV QSFGHQHLSV FGVGKARTEA EWRSLFRQLV ARGLADIDLE
GYGGLRLSDT CRPLLRGEVS LELRRDLKPQ TTSRSSSGSP ASQLVRGEER EQWEALRALR
RKLAEEHGVP PYVIFPDSTL LEMLRSKPGS MAEMAKVSGV GARKLERYGE AFLEVLSGKT
EAPQVVADIR HELISLARAG MTPTQIAGQL QCSEKNVYTL LAEAIGKQQL SIEQALDLPE
DLLGEVQDAF LDGEGELPPV SAIAEQFAGR VPEGVLYCVR AALQSEFEV
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