| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1629 |
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| Symbol | csrA-1 |
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| ID | 1183266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1784879 |
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| End bp | 1785073 |
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| Gene Length | 195 bp |
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| Protein Length | 64 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393001 |
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| Product | carbon storage regulator |
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| Protein accession | NP_791454 |
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| Protein GI | 28868835 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.634054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTAT TGACGCGGGA CATTGGCGAA ACGTTTTCCA TTGGTGATGA CATCACCGTG
CAGATTCTGG GCGTGAACGG CAATCAGGTC CGACTGGGCA TCAGTGCGCC CAAGGACATC
AAGGTTCACC GGGCCGAGGT GTACAAGCGA ATCGCCAACA AGCTTTCGCA GCAGGCCGCG
CAGACGCAGC CATAG
|
|---|
| Protein sequence | MLVLTRDIGE TFSIGDDITV QILGVNGNQV RLGISAPKDI KVHRAEVYKR IANKLSQQAA
QTQP
|
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| |