Gene PSPTO_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1626 
Symbol 
ID1183263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1782846 
End bp1783223 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content60% 
IMG OID637392998 
Producthypothetical protein 
Protein accessionNP_791451 
Protein GI28868832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.341963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATC GAATAGCGGC AGATGCGGTA GTGGCGTTTC ACCTCCTGTT CATTGTGTTC 
GTTCTGCTTG GCGGGCTGCT GGTATGGAAA AGGCCCTGGC TGGCCTTGCT GCACGTTCCG
GCCATCATCT GGGGGGCGGC AGTCGAGTTT CTGCACCTCT ATTGCCCGCT GACACCGCTG
GAAAATGCCC TGCGCAGTAG CGCTGGCGAG CAGGGTTATG ACGGGGGCTT TGTCGAGCAT
TACCTGATCC CGCTGATTTA CCCGGCAGGG CTGACGCCTG GCGTGCAACT CTGGCTGGGC
GGCATTGTTG TGCTGGTCAA TGTGATGGTG TACGGCAGGC TGCTGGTGCA TTACGTGTCC
CGCGCGCGGC GCTCATGA
 
Protein sequence
MFYRIAADAV VAFHLLFIVF VLLGGLLVWK RPWLALLHVP AIIWGAAVEF LHLYCPLTPL 
ENALRSSAGE QGYDGGFVEH YLIPLIYPAG LTPGVQLWLG GIVVLVNVMV YGRLLVHYVS
RARRS