| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1582 |
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| Symbol | |
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| ID | 1183219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1742565 |
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| End bp | 1743326 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392954 |
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| Product | oxidoreductase, short-chain dehydrogenase/reductase family |
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| Protein accession | NP_791407 |
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| Protein GI | 28868788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.518044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGA GCGCAAAGAC AGTACTGATC ACAGGGGGGA CGAGCGGAAT AGGCCTTGAA
CTCGCCCGCC GCTTTCTGGC CATGGGAAAC GTTGTCATCA TTACCGGGCG GGACGAGGCA
AGATTACAAG CAGCCCAGCG CGAGTTGCCG GGTGTCAAGG CAATACGCAG CGACGTCGGC
CGACCAGAAG ACATTGTGAA GTTGCATGAG CAACTGATGC GCGAATTTCC GACGCTCGAT
ATTCTGGTGA ACAACGCAGG CATCATGCGC AACATCGAAC TTTCTGCGCT CCGCTCGCTT
GATGATGTAG CGGTTGAAAT CGACGTTGAT CTGAATGGCC CGATCAGAAT GGTGCAGCAG
TTTCTCCCGC ACCTGCTCAG TCGGCCTCAG GCAATGATCG TCAATATTAC CTCCGGGCTG
GCGTTCGTTC CCTTTACGGC GTCTCCGATC TACAGCGCCG CGAAGGCCGG GTTACATGCC
TACATGCGTG CATTGCGCGT GCAATTCAAA AATACCTCAC TCAACGTGAT CGAGATTGCT
CCGCCGAGTA CCGACACTGC GCTGTTTAAC AACCTGGTCA GCGAGCACGC GGCAAAAGGC
CCGGCGCCTA TGCCGCTCGC TAAACTTGTC GATCAGGCGA TGGCCGGTAT TGCAGCAGGA
AAGACTGAGA TTCGCCCAGG CTTGAGCCAG ATGCTGTATT TGCTGAGCCG CATCTCGCCG
CAGTTCGGAT TGCGGCAACT GGCCAAGGCG TCGGGATACT GA
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| Protein sequence | MNLSAKTVLI TGGTSGIGLE LARRFLAMGN VVIITGRDEA RLQAAQRELP GVKAIRSDVG
RPEDIVKLHE QLMREFPTLD ILVNNAGIMR NIELSALRSL DDVAVEIDVD LNGPIRMVQQ
FLPHLLSRPQ AMIVNITSGL AFVPFTASPI YSAAKAGLHA YMRALRVQFK NTSLNVIEIA
PPSTDTALFN NLVSEHAAKG PAPMPLAKLV DQAMAGIAAG KTEIRPGLSQ MLYLLSRISP
QFGLRQLAKA SGY
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