Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1559 |
Symbol | |
ID | 1183196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1722062 |
End bp | 1722907 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392931 |
Product | esterase, putative |
Protein accession | NP_791384 |
Protein GI | 28868765 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.41528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTGG AAAATATTTC GTGCCAGAAA AGCTTCGGTG GCTGGCACAA GCGTTACAAA CATCACTCTC AGGTGCTGGG CTGCGACATG GTATTTGCCG TCTACCTGCC GCCTCAGGCA GAGCAGGGCG GCAAGCTGCC CGTGCTGTAT TGGCTGTCGG GTCTGACCTG CACGGACGAA AACTTCATGC AGAAAGCAGC GGCCCTGCGG TTCGCGGCGG AGCTGGGTAT TATCATCGTC GCGCCTGATA CCAGCCCGCG CGGGGCCGAT GTGCCGGACG ACCCTGAGGG TGCCTGGGAC TTCGGTCACG GCGCAGGTTT CTACCTCAAT GCCACCGAGC AGCCGTATGC GCGGCATTAT CAAATGCACG ATTACGTGGT CAAGGAGTTG CCCGCACTGG TCGAAGCGCA CTTTCCGGCC TCACAGGCCC GCAGTATCAG TGGCCACTCG ATGGGTGGTC ACGGCGCGCT GGTGTGTGCC TTGCGCAATC CGGGTCGTTA CAAATCGGTG TCGGCATTTT CGCCAATCAG CAATCCGATC GATTGCCCGT GGGGTCAGAA GGCATTCTCG CGTTACTTGG GCGAAGACCG CTCGCGCTGG CGTGAATGGG ATGCCAGCGT GTTGATTGCC GAGGCTGCGG AAAAACTTCC GACGCTGGTT GATCAGGGTG ATCGTGACGA TTTTCTGCTC AATCAGCTCA AGCCAGAGGT GTTGGTTCAG GCCGCGAAAG CTGCGCATTA TCCGCTCACA CTGCGGATGC AGCCTGGCTA TGACCACAGC TATTTCTTCA TCGCCAGTTT CATCGAAGAC CATCTGAGGC ATCACGCTGC AGCCTTGAAC AGCTAA
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Protein sequence | MPLENISCQK SFGGWHKRYK HHSQVLGCDM VFAVYLPPQA EQGGKLPVLY WLSGLTCTDE NFMQKAAALR FAAELGIIIV APDTSPRGAD VPDDPEGAWD FGHGAGFYLN ATEQPYARHY QMHDYVVKEL PALVEAHFPA SQARSISGHS MGGHGALVCA LRNPGRYKSV SAFSPISNPI DCPWGQKAFS RYLGEDRSRW REWDASVLIA EAAEKLPTLV DQGDRDDFLL NQLKPEVLVQ AAKAAHYPLT LRMQPGYDHS YFFIASFIED HLRHHAAALN S
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