Gene PSPTO_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1559 
Symbol 
ID1183196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1722062 
End bp1722907 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID637392931 
Productesterase, putative 
Protein accessionNP_791384 
Protein GI28868765 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.41528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTGG AAAATATTTC GTGCCAGAAA AGCTTCGGTG GCTGGCACAA GCGTTACAAA 
CATCACTCTC AGGTGCTGGG CTGCGACATG GTATTTGCCG TCTACCTGCC GCCTCAGGCA
GAGCAGGGCG GCAAGCTGCC CGTGCTGTAT TGGCTGTCGG GTCTGACCTG CACGGACGAA
AACTTCATGC AGAAAGCAGC GGCCCTGCGG TTCGCGGCGG AGCTGGGTAT TATCATCGTC
GCGCCTGATA CCAGCCCGCG CGGGGCCGAT GTGCCGGACG ACCCTGAGGG TGCCTGGGAC
TTCGGTCACG GCGCAGGTTT CTACCTCAAT GCCACCGAGC AGCCGTATGC GCGGCATTAT
CAAATGCACG ATTACGTGGT CAAGGAGTTG CCCGCACTGG TCGAAGCGCA CTTTCCGGCC
TCACAGGCCC GCAGTATCAG TGGCCACTCG ATGGGTGGTC ACGGCGCGCT GGTGTGTGCC
TTGCGCAATC CGGGTCGTTA CAAATCGGTG TCGGCATTTT CGCCAATCAG CAATCCGATC
GATTGCCCGT GGGGTCAGAA GGCATTCTCG CGTTACTTGG GCGAAGACCG CTCGCGCTGG
CGTGAATGGG ATGCCAGCGT GTTGATTGCC GAGGCTGCGG AAAAACTTCC GACGCTGGTT
GATCAGGGTG ATCGTGACGA TTTTCTGCTC AATCAGCTCA AGCCAGAGGT GTTGGTTCAG
GCCGCGAAAG CTGCGCATTA TCCGCTCACA CTGCGGATGC AGCCTGGCTA TGACCACAGC
TATTTCTTCA TCGCCAGTTT CATCGAAGAC CATCTGAGGC ATCACGCTGC AGCCTTGAAC
AGCTAA
 
Protein sequence
MPLENISCQK SFGGWHKRYK HHSQVLGCDM VFAVYLPPQA EQGGKLPVLY WLSGLTCTDE 
NFMQKAAALR FAAELGIIIV APDTSPRGAD VPDDPEGAWD FGHGAGFYLN ATEQPYARHY
QMHDYVVKEL PALVEAHFPA SQARSISGHS MGGHGALVCA LRNPGRYKSV SAFSPISNPI
DCPWGQKAFS RYLGEDRSRW REWDASVLIA EAAEKLPTLV DQGDRDDFLL NQLKPEVLVQ
AAKAAHYPLT LRMQPGYDHS YFFIASFIED HLRHHAAALN S