| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1544 |
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| Symbol | lpxD |
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| ID | 1183181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1704128 |
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| End bp | 1705183 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392916 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | NP_791369 |
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| Protein GI | 28868750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA CCATCAAGCT CGGCCAGTTG GCCGAGTTCC TTGGCGCTAC GCTACGTGGC
GACAAGGACA AGGACATTAC CGGGCTGGCC ACTCTGGAAG AGGCCGGCCC TGGTCAAATC
AGTTTCCTGG CAAAACCTCA ATACCGTAAA TACCTGGTCG ATACCCAGGC CGCTGCTGTG
CTGCTCAAGC CTGCAGATGC CGACGGTTAC ACCGGTGATG CGCTATTGGT CCCGGATCCT
TATCTGGCCT ACGCGCGCAT TTCGCATTTT TTTGACCCCA AGCCTAAAAG CAGTGCAGGT
GTTCATCCAA CAGCCGTGAT TGCCGAGGAT GCGCAGGTTG ATCCTGCGGC CAGCATCGGC
GCGTTTGCTG TGATCGAGAG CGGTGCCCGT ATCGCGGCCA ATGTCACCAT CGGTGCGCAT
TGCTTCATCG GCGCCCGTAG CGAGATCGGT GAAGGTGGCT GGCTGGCTCC GCGTGTGACG
CTTTACCACG ACGTGCGCAT TGGCAAACGT GTGGTCATTC AGTCGGGTGC GGTGCTGGGC
GGCGAAGGCT TTGGCTTTGT CAACGACAAG GGTGTCTGGC AGAAGTTTGC ACAAATCGGT
GGCGTCACCT TGGGTGACGA CGTCGAGATC GGCGTCAATA CCGCGATTGA TCGTGGCGCG
CTGTCTGATA CGCGAATTGG CAATGGTGTG AAACTGGATA ACCAGATTCA CATTGCCCAC
AACGTGCAGA TCGGCGATCA CACGGCAATG GCTGCGTGTG TGGGCATCTC CGGAAGCGCC
AAAATCGGCA AGCACTGTAT GCTGGCCGGC GGTGTCGGGC TGGTGGGGCA TATCGACATC
TGTGATGGCG TTTACATCAC CGGCATGACC ATGGTGACCC ATTCCATCAC CGAGCCGGGT
TCCTACTCGT CGGGTACGGC AATGCAGCCA TCTGCAGAAT GGCGCAAGAG TGCAGCTCGT
CTGCGCAAGA TCGATGACAT GGCGCGACGT CTGCAAAAGC TCGAAAAGGC TGTCGAGACG
GTGACCTGCG CCGATAATCG CTCATCTGAT GGCTGA
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| Protein sequence | MSITIKLGQL AEFLGATLRG DKDKDITGLA TLEEAGPGQI SFLAKPQYRK YLVDTQAAAV
LLKPADADGY TGDALLVPDP YLAYARISHF FDPKPKSSAG VHPTAVIAED AQVDPAASIG
AFAVIESGAR IAANVTIGAH CFIGARSEIG EGGWLAPRVT LYHDVRIGKR VVIQSGAVLG
GEGFGFVNDK GVWQKFAQIG GVTLGDDVEI GVNTAIDRGA LSDTRIGNGV KLDNQIHIAH
NVQIGDHTAM AACVGISGSA KIGKHCMLAG GVGLVGHIDI CDGVYITGMT MVTHSITEPG
SYSSGTAMQP SAEWRKSAAR LRKIDDMARR LQKLEKAVET VTCADNRSSD G
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