Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1525 |
Symbol | |
ID | 1183162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1682938 |
End bp | 1683768 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392897 |
Product | ThiF family protein |
Protein accession | NP_791350 |
Protein GI | 28868731 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.822958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAG ACGATCCACG TTTCGCAGGC ATCGCCCGTT TATACGGCAT TGAGGGGCTG GCACGCCTGC GCGCGGCTCA TGTAGCGATC GTTGGCATCG GCGGCGTGGG CTCGTGGGCG GCGGAAGCCA TGGCGCGCAG TGGCGTTGGC GAGATTTCGC TGTTCGACAT GGACGACGTC TGTGTCAGCA ACAGCAACCG CCAGCTACAC GCGCTGGACA CGACCGTGGG GCGGCCCAAG GTCGAGGTGA TGGCCGAGCG CATCCGGGCG ATCAACCCTG ATTGCGTCGT GCATGCGGTG TCTGATTTCG TGACGCGCGA CACGATGGCC GAGTGCATTA CCCCGGACAT GGACTTTGTG ATCGACTGCA TCGACAGCGT CAATGCCAAG GCTGCGCTGA TCTCCTGGTG CAAACGACGC AAGATTCAAA TGGTCACTAC CGGCGCGGCG GGCGGGCAGA TCGACCCGAC GCTGATCCAG ATCGCTGACC TGAACCGCAC GTTCAATGAC CCGCTGGCTT CCAAGGTGCG TTCCACCTTG CGTCGCGATT ACGGCTTTTC ACGCACCCCG AACCGCCATT ACAGCGTGCC TTGCGTGTTT TCCACCGAGC AACTGCGCTA TCCCAAGCCT GACGGCAGCA TTTGTCTGGA AAAGAAGTTC ATTGGTGATG GCGTCAAGCT GGACTGTGCC GGTGGCTTTG GTGCTGTGAT GATGGTGACC GCCACCTTCG GCATGATCGC CGCCACTCGC GCCGTCGACA AACTGGTTGC CGGCACACGG CGGCCGTCCG AACGTGCAAA GCCGGCGGCT GTGACGGCCA ATCAGGCTTG A
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Protein sequence | MSTDDPRFAG IARLYGIEGL ARLRAAHVAI VGIGGVGSWA AEAMARSGVG EISLFDMDDV CVSNSNRQLH ALDTTVGRPK VEVMAERIRA INPDCVVHAV SDFVTRDTMA ECITPDMDFV IDCIDSVNAK AALISWCKRR KIQMVTTGAA GGQIDPTLIQ IADLNRTFND PLASKVRSTL RRDYGFSRTP NRHYSVPCVF STEQLRYPKP DGSICLEKKF IGDGVKLDCA GGFGAVMMVT ATFGMIAATR AVDKLVAGTR RPSERAKPAA VTANQA
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