| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1506 |
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| Symbol | |
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| ID | 1183143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1663462 |
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| End bp | 1664244 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392878 |
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| Product | ompA family protein |
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| Protein accession | NP_791331 |
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| Protein GI | 28868712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTAAAC AATTGATGAT CCCTGCTCTG CTGGCCATGA GCGTTGCGTT GGCAGCCTGT
GCAACCAAGC CTAACCCTAA CCTGGAACAG GCACGCAGCA ACTTCACCGC GCTGCAGACC
AACCCTGAGT CCACCAAAGT CGCCGCCCTG GAAACCAAGG ACGCGAGCGA ATGGCTGGCC
AAGGCAGAGC AGGCGTTCCG TAATGATGAC GACGTCAAGA AAGTCGATCA GCTTTCTTAC
CTGACCAACC AGCGCGTCGA GCTGGCCAAG CAGACCATCG CCCTGCGCAC CTCCGAAGCC
GCTCTGCAGA ACGCTTCTGC CGACCGTGCC AAGGCTCGCC TGGAAGCGCG TGACGCTCAG
ATCGCTGCGC TGAAAAACAG CCTGAACGCC AAGCAGACCG AACGCGGTAC GCTGGTGACT
TTCGGTGACG TGCTGTTCGA CTACAACAAG GCCGAGCTGA AGCCAACCGC CCAGGGCGAC
ATCGGCAAGC TGGCTGCGTT CCTGCAGGAA AACACTGACC GCAAAGTGAT TGTCGAAGGC
TACACCGACA GCACCGGTTC GGCTTCCTAC AACCAGTCGC TGTCCGAGCG CCGCGCCAAT
TCGGTTCGTA TGGCACTGGT CCGCATGGGT GTAGACCCGG CGCGCGTTGT GACCATGGGT
TATGGCAAGG AATATCCGGT TGCTGACAAC TCCAGCAACT CGGGCCGCGC CATGAATCGT
CGTGTGGAAG TGACCATTTC CAACGACAAC CAGCCTGTTG CCCCACGCTC GTCGATGAAA
TAA
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| Protein sequence | MRKQLMIPAL LAMSVALAAC ATKPNPNLEQ ARSNFTALQT NPESTKVAAL ETKDASEWLA
KAEQAFRNDD DVKKVDQLSY LTNQRVELAK QTIALRTSEA ALQNASADRA KARLEARDAQ
IAALKNSLNA KQTERGTLVT FGDVLFDYNK AELKPTAQGD IGKLAAFLQE NTDRKVIVEG
YTDSTGSASY NQSLSERRAN SVRMALVRMG VDPARVVTMG YGKEYPVADN SSNSGRAMNR
RVEVTISNDN QPVAPRSSMK
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