Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1493 |
Symbol | |
ID | 1183130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1648356 |
End bp | 1649978 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392866 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_791319 |
Protein GI | 28868700 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAACT GGACCTTGCG CCAACGGATT CTGGCGAGTT TTGCCGTCAT CATCGCAATC ATGCTGCTGA TGGTGGTTGT GTCGTATTCA CGACTGTTGT CCATCGAGTC CAGCGAGGAA GATGTCCGTC TCGATGCGTT GCCCGGTGTT TACTACAGCA CGCTGGTGCG CAGCGCGTGG GGTGAAAGTT ACATCCGCAC GCTGGAGCTG ATTGCCGAAG GGCAGGGGCG TCCGCTGACC AAGCAGGAAA AAGACCAGTT TCAGAGCTTT GACGAAAACC TGCAGGCACA GATGGATGGC TACAAGAAGT CTATCTTCAC TGATGAAGAC CGAGACGGCT TCGCAATTTT CGAGAAGCGC CGCGAGGCTT ATTCGCGCAT GCTTGCCGAG GTTCACTCCA AGTATGATCG AGGCGACTAC GCTGGCGCAC GCGCCGAGTT CTATAGCGAT GTAAACCCGG TCTGGCTCGC CGGCCGCAAA CAGCTCAATG AGCTCATCGT GGCCAATAAA CAGCTGGCTG ATCAGGCTAC CGCCAACATT GTCAACGCCG TACTGGCTGC CAAGATCAGC ATGATCCTGT CGCTGCTGGT CGCCGTGCTG GCGGCTGCGG CCTGCGGTCT GCTGCTGATG CGTTCGATCA TGGCACCGAT GCAACTGATC GTGCGGATCC TCGACATCAT GCGTACCGGC GACCTGAGCA CGCGCTTGAA CCTGTCCCGC AAGGACGAGT TCAATGCGGT CGAGACCGGC TTCAACGACA TGATGACCGA CCTCACCACG CTGGTCGCCC AGGCGCAGCG TTCGTCGGTA CAGGTCACCA CGTCAGTTAC CGAAATCGCC GCGACGTCCC GTCAACAACA GGCCACGGCC ACCGAGACCG CCGCAACCAC CACCGAGATC GGCGCAACTT CGCGGGAAAT TGCCGCCACT TCGCGGGACC TGGTACGCAC CATGACCGAA GTTACCTCGG CGGCCGATCA GGCCTCGGTG CTCGCCGGTT CCGGCCAGCA GGGCCTGGCG CGTATGGAAG ACACCATGCA TCAGGTGATG GGCGCGGCCA ATCTGGTCAA CGCCAAACTG GCGATCCTCA ACGAGAAGGC CGGTAACATC AATCAGGTGG TCGTCACCAT CGTCAAGGTG GCCGACCAGA CCAATCTGCT GTCGTTGAAC GCGGCCATCG AGGCCGAGAA AGCCGGTGAA TACGGTCGCG GTTTTGCCGT GGTGGCCACC GAGGTGCGCC GTCTGGCCGA CCAGACCGCT GTCGCCACCT ACGACATCGA GCAGATGGTG CGTGAGATCC AGTCAGCGGT GTCCGCAGGC GTGATGGGCA TGGACAAGTT CTCCGAAGAA GTGCGCCGCG GCATGTTCGA GGTCACTCAG GTCGGCGAAC AGTTGTCGCA GATCATTCAT CAGGTTCAGG CCCTGGCACC GCGCGTGCTG ATGGTCAATG AAGGGATGCA GGCGCAGGCC ACGGGCGCCG AGCAGATCAA TCAGGCGCTG GTGCAACTGG CCGATGCCAG CAGCCAGACC GTCGACTCAC TGCGTCAAGC CAGCTTCGCC ATTGACGAGT TGAGTCAGGT AGCGGTCGGG CTGCGCGGTG GCGTGTCGCG TTTCAAGGTC TGA
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Protein sequence | MKNWTLRQRI LASFAVIIAI MLLMVVVSYS RLLSIESSEE DVRLDALPGV YYSTLVRSAW GESYIRTLEL IAEGQGRPLT KQEKDQFQSF DENLQAQMDG YKKSIFTDED RDGFAIFEKR REAYSRMLAE VHSKYDRGDY AGARAEFYSD VNPVWLAGRK QLNELIVANK QLADQATANI VNAVLAAKIS MILSLLVAVL AAAACGLLLM RSIMAPMQLI VRILDIMRTG DLSTRLNLSR KDEFNAVETG FNDMMTDLTT LVAQAQRSSV QVTTSVTEIA ATSRQQQATA TETAATTTEI GATSREIAAT SRDLVRTMTE VTSAADQASV LAGSGQQGLA RMEDTMHQVM GAANLVNAKL AILNEKAGNI NQVVVTIVKV ADQTNLLSLN AAIEAEKAGE YGRGFAVVAT EVRRLADQTA VATYDIEQMV REIQSAVSAG VMGMDKFSEE VRRGMFEVTQ VGEQLSQIIH QVQALAPRVL MVNEGMQAQA TGAEQINQAL VQLADASSQT VDSLRQASFA IDELSQVAVG LRGGVSRFKV
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