| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1489 |
|---|
| Symbol | |
|---|
| ID | 1183126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1637777 |
|---|
| End bp | 1638883 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637392862 |
|---|
| Product | xenobiotic reductase, putative |
|---|
| Protein accession | NP_791315 |
|---|
| Protein GI | 28868696 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.803856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC TGTTAGAACC CTACACGCTG CGTCAATTGA CCCTGCGCAA CCGCATTGCC
GTTTCACCCA TGTGCCAATA TTCCAGTGTC GACGGCCTGG CCAATGACTG GCACCTGGTC
CACCTGGGAA GTCGCGCGGT GGGCGGTGCC GGGCTGGTCA TGAGCGAAGC GATGGCCGTG
ACGCCGGACG GTCGGATCAC GCCCGAAGAC CTCGGCCTGT GGAACGATGA ACAGATCGAG
CCGCTGCAAC GCATTACGCG CTTCATCAAT GCCCAAGGCG CGGTTGCAGG TATTCAACTG
GCTCACGCCG GGCGCAAGGC CAGCACTTGG CGCCCGTGGC TGGGCAAACA CGGTAGTGTG
CCGCTCAATG AAGGTGGCTG GACGCCGGTC GGGCCATCGG CGATTGCCTT CGATCCGCAG
CACACCGCAC CTGTGCAACT CAGCGAAACG CAGATCAAGG AACTGATCGA GGCATTCGTC
GAGTCCGCAC GCCGTGCCCT GACCGCGGGC TTCAAAGTGG TGGAAATTCA CGCTGCGCAC
GGCTACCTGC TGCACCAGTT CCTGTCGCCC TTGAGCAATC AGCGCACCGA CCAGTACGGC
GGCTCGTTCG AGAACCGGAT TCGCCTGACC CTGCAAGTGA CCGAAGCGGT GCACGCGGTG
TGGCCTGAAG AGCTGCCCTT GTTCGTCCGT GTGTCTGCCA CCGATTGGGT GGAAGACGGC
TGGAACGCTG ATGAAACCGT CGAGCTGGCG CGTCGCTTGA AAGCGCTGGG CACCGACCTG
ATCGATGTGT CGTCGGGCGG AACGTCGGCC AACGCGGAAA TCCCGGTAGG CCCGGGCTAT
CAGACGCGGT TTGCCGAGCG CGTGCGCAAG GAGTCCGACA TTGCCACAGG CACGGTGGGC
ATGATTACCG ATCCTGCCCA GGCAGAGCAT ATTCTGCGTA CGGGCCAGGC CGACATCATT
CTGTTGGCAC GAGAGCTGTT GCGTGACCCG TACTGGCCGC TGCGTGCCGA TGAGGACCTG
GGTGGACGCC TGGCGACGTG GCCTGCGCAG TACCAGCGCG CGACCCATCG CGATCAGCCG
ATTCATGAGT CTGATTTGCG CGACTGA
|
|---|
| Protein sequence | MSLLLEPYTL RQLTLRNRIA VSPMCQYSSV DGLANDWHLV HLGSRAVGGA GLVMSEAMAV
TPDGRITPED LGLWNDEQIE PLQRITRFIN AQGAVAGIQL AHAGRKASTW RPWLGKHGSV
PLNEGGWTPV GPSAIAFDPQ HTAPVQLSET QIKELIEAFV ESARRALTAG FKVVEIHAAH
GYLLHQFLSP LSNQRTDQYG GSFENRIRLT LQVTEAVHAV WPEELPLFVR VSATDWVEDG
WNADETVELA RRLKALGTDL IDVSSGGTSA NAEIPVGPGY QTRFAERVRK ESDIATGTVG
MITDPAQAEH ILRTGQADII LLARELLRDP YWPLRADEDL GGRLATWPAQ YQRATHRDQP
IHESDLRD
|
|---|
| |