| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1488 |
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| Symbol | recJ |
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| ID | 1183125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1635953 |
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| End bp | 1637662 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392861 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | NP_791314 |
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| Protein GI | 28868695 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTG AACCTCGTCC GTTGCCCGAC ACTTTGCCGT TTCTTGGCGA CCTGCCGCCC
TTGCTCACAC GTCTGTACGC GGCCAGAGGT GTGGCATGCG AGGCCGAGCT GGACAAAAGC
CTGGCGCGAC TGATCCCCTA TCAGCAGCTC AAAGGTATAG ATGCAGCTGT AGACCTGCTG
GTGACCGCCC TGCGTGAAGG TCAGCGCATG CTGATCGTCT GCGACTTCGA TGCCGACGGC
GCGACCGCCT GTACGGTCGG AGTGCTGGGC CTGCGTTTGC TGGGTGCGGC GCACGTTGAT
TATCTGGTGC CCAACCGCTT TGAATACGGC TACGGCCTGA CCCCGGAAAT CGTCGAAGTA
GCTCTGCAGC GCGAGCCGCA GCTGCTGATC ACCGTGGATA ACGGCATTTC AAGTGTCGAG
GGCGTGGCGG CGGCCAAGGC GGCAGGCTTG CAAGTGCTGG TCACCGACCA CCACTTGCCC
GGTCACGAGC TTCCGGCGGC AGACGCCATC GTCAACCCAA ATCAGCCAGG GTGCACCTTT
CCCAGTAAAT CGCTGGCGGG CGTGGGGGTG ATCTTTTACG TGTTGATGGC CCTGCGAGCA
CGCTTGCGTG ACACCGGCTG GTTCGATCAG CGTGCCCAGC CCAATCTGGG CGAACTGCTC
GATCTGGTGG CGCTGGGCAG CGTCGCTGAC GTCGTGCCGC TGGACGCCAA TAACCGCATT
CTGGTGCACC AGGGGCTGAT GCGTATCCGT GCGGGCCGCG CCCGCCCCGG GCTGCGCGCG
ATTCTGGAAG TCGCACGGCG TGAGCCTGCG CGCATCACTT CAACGGACCT GGGGTTCATT
CTGGGCCCGC GCCTGAACGC GGCGGGGCGT CTGGATGACA TGAGCCTGGG CATCGAATGC
CTGCTCTGCG ACGATCCGAC ACGGGCGCGG GAAATGGCCG TGCAACTGGA CGAACTGAAT
CAGGACCGCA AGTCCATCGA GCAGGGCATG CAGCGCGAAG CACTTGCGCA GCTCAAGGAC
CTGCCGATGG AGTCCATGCC GTTCGGGCTG TGCCTGTTCG ATGCGGAGTG GCATCAGGGC
GTCATCGGTA TTCTCGCCTC GCGGCTCAAG GAGCGTTACC ACCGGCCCAC CATCGCGTTT
GCCAGTGCCG GGGAGGGCGT GCTCAAGGGC TCGGCACGCT CGGTGCCGGG TTTTCACATC
CGTGACGCGC TGGACGCCGT GGCCGCGGGT CACCCTCACT TGATCAGCAA GTTTGGCGGG
CACGCCATGG CGGCAGGCCT CTCGCTGCCC GAAGATAACT TTCCGGCGTT TGCCGAGGCG
TTCGACCTGG AAGTGCGCCG CCAGCTGGAT GAACAGGACC TTACCGGGCG CCTGCTGTCT
GACGGCTCGC TGGCGGTCGA AGAGTTTCAC CTGGAGCTGG CCCGCGCCCT GCGCAATGCA
GGCCCTTGGG GTCAGCATTT CCCTGAGCCG CTGTTTCATG GTGTATTTCA GCTGGTCGAG
CAACGCGTCG TGGGCGAACG ACATTTGAAG ATGGTGCTCA AGACCGAATG TGGCAGCGTG
AGGCTGGACG GTATCGCGTT CAGCGTCGAC CGCGACATCT GGCCCAACCC CAATATTCGC
TGGGTCGAGC TGGCTTATAA ACTCGACCTC AACGAGTTTC GCGGCAACGA AACCGTGCAA
TTGATGGTGG TGCACATCGC GCCACGCTGA
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| Protein sequence | MRIEPRPLPD TLPFLGDLPP LLTRLYAARG VACEAELDKS LARLIPYQQL KGIDAAVDLL
VTALREGQRM LIVCDFDADG ATACTVGVLG LRLLGAAHVD YLVPNRFEYG YGLTPEIVEV
ALQREPQLLI TVDNGISSVE GVAAAKAAGL QVLVTDHHLP GHELPAADAI VNPNQPGCTF
PSKSLAGVGV IFYVLMALRA RLRDTGWFDQ RAQPNLGELL DLVALGSVAD VVPLDANNRI
LVHQGLMRIR AGRARPGLRA ILEVARREPA RITSTDLGFI LGPRLNAAGR LDDMSLGIEC
LLCDDPTRAR EMAVQLDELN QDRKSIEQGM QREALAQLKD LPMESMPFGL CLFDAEWHQG
VIGILASRLK ERYHRPTIAF ASAGEGVLKG SARSVPGFHI RDALDAVAAG HPHLISKFGG
HAMAAGLSLP EDNFPAFAEA FDLEVRRQLD EQDLTGRLLS DGSLAVEEFH LELARALRNA
GPWGQHFPEP LFHGVFQLVE QRVVGERHLK MVLKTECGSV RLDGIAFSVD RDIWPNPNIR
WVELAYKLDL NEFRGNETVQ LMVVHIAPR
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