Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1481 |
Symbol | thrC |
ID | 1183118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1626188 |
End bp | 1627597 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392854 |
Product | threonine synthase |
Protein accession | NP_791307 |
Protein GI | 28868688 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.77093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTATA TCAGTACTCG CGGGCAAGCG CCTGCATTGA ATTTCGAAGA CGTGCTGTTG ACTGGTCTGG CCAGCGATGG TGGTCTGTAT GTGCCGGAAA ACCTGCCACG TTTCACACAG GAAGAGATCG CTTCCTGGGC CGGCCTGCCG TATCACGAGC TGGCCTTCAA GGTGATGCGC CCGTTCGTCG CCGGAAGCAT TCCGGACGCC GATTTCAAGA AGATCCTGGA AGAAACCTAT GGTGTCTTCG CCCACAGCTC GGTCGCGCCG TTGCGCCAGT TGAACGGCAA CGAGTGGGTG CTTGAGCTGT TCCACGGCCC GACCCTGGCG TTCAAGGACT TTGCCCTGCA ATTGCTCGGT CGTTTGCTGG ACTACGTGCT GGCCAAGCGC GGCGAGCGTG TGGTGATCAT CGGTGCCACT TCGGGCGATA CCGGTTCTGC GGCCATCGAA GGCTGCCGTC GCTGCGATAA CGTCGATATC TTCATCCTGC ACCCGAACAA CCGTGTATCG GATGTTCAGC GTCGGCAGAT GACCACCATC TTTGGCGATA ACATTCATAA CATCGCAGTG GAAGGCAACT TCGACGACTG CCAGGAAATG GTCAAGGACA GCTTCGCCGA TCAGAGCTTC CTCAAGGGCA CGCGTCTGGT GGCGGTCAAC TCGATCAACT GGGCGCGGAT CATGGCCCAG ATCGTCTACT ACTTCCATGC ATCGCTGCAG TTGGGCGGCC CGGCGCGTTC GGTATCGTTC TCGGTGCCGA CCGGCAACTT CGGCGACATC TTCGCCGGTT ACCTGGCGCG CAACATGGGG CTGCCGGTCA ATCAACTGAT CGTTGCCACC AACCGCAATG ACATTCTGCA CCGCTTCATG AGCGGCAATC AGTACGTCAA GGAAACCCTG CACGCAACGT TGTCGCCGTC GATGGACATC ATGGTCTCGT CGAATTTCGA GCGCCTGCTG TTCGACATGC ACGGTCGCAA CGGCTCGGCG ATTGCCGATC TGATGAGCAA TTTCAGGCAG GGCGGCGGTT TCAGTGTCGA AGAAGAGCGC TGGACCGAAA CCCGCAAACT GTTCGACTCG CTGGCGGTCA GCGACGAAGA CACCTGCAAG ACCATCGCCG AGGTGTTCGC CAGCACCGGC GAGCTGCTCG ACCCGCACAC TGCTATCGGT GTGAAGGCTG CCCGCGAATG CCGTCGCAGC CTTGACACCC CGATGGTGAT TCTGGGGACG GCACATCCGG TCAAGTTCGC TGAGTCAGTG GAGAAGGCCG GTGTAGGAAA AGCGCTGGAG CTACCTGCAC ATTTGTCTGA TTTGTTCGAG CGTGACGAAC GTTGCACCGT GTTGCCAAAT GACCTGAAAG CCATACAGGC GTTTGTCAGC CAGCATGGCA ATCGCGGCAA ACCGCTCTGA
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Protein sequence | MRYISTRGQA PALNFEDVLL TGLASDGGLY VPENLPRFTQ EEIASWAGLP YHELAFKVMR PFVAGSIPDA DFKKILEETY GVFAHSSVAP LRQLNGNEWV LELFHGPTLA FKDFALQLLG RLLDYVLAKR GERVVIIGAT SGDTGSAAIE GCRRCDNVDI FILHPNNRVS DVQRRQMTTI FGDNIHNIAV EGNFDDCQEM VKDSFADQSF LKGTRLVAVN SINWARIMAQ IVYYFHASLQ LGGPARSVSF SVPTGNFGDI FAGYLARNMG LPVNQLIVAT NRNDILHRFM SGNQYVKETL HATLSPSMDI MVSSNFERLL FDMHGRNGSA IADLMSNFRQ GGGFSVEEER WTETRKLFDS LAVSDEDTCK TIAEVFASTG ELLDPHTAIG VKAARECRRS LDTPMVILGT AHPVKFAESV EKAGVGKALE LPAHLSDLFE RDERCTVLPN DLKAIQAFVS QHGNRGKPL
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