Gene PSPTO_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1477 
Symbol 
ID1183114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1621273 
End bp1622733 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content54% 
IMG OID637392850 
ProductISPsy6, transposase 
Protein accessionNP_791303 
Protein GI28868684 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0568677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGTA TCGAAAGATA CAGAGCATTT TTCGTTATGG CCTACATCCA AGGTGAGTCC 
CGCAGCCAGA CCAGCCTATT CCCGGTCTCG CTGGAAGAGT TGATCCCCGA GGATCACCTC
GTTCGTGTCA TTGACCTGTA CGTTGCCAAG CTCGATCTGG TGCAACTGGG CTTCGATAAA
GCGATTCCAA AAAGCACGGG GCGCCCTGCT TATGATCCCG CCGATCAGCT AAAACTCTAC
CTCTACGGCT ATTTTCAGCG GATTCGCTCA TCGCGACGTC TTGAAGCCGA GTGTCAGCGC
AACATCGAAG TGATGTGGCT GATCAACCGG CTCAAGCCCG ACTTCAAGAC CATCGCCGAC
TTTCGCAAGA ACAATAAACC CGCCTTCATC GCGACCTGCC GTGCTTTCGT TCGATTTTGT
CGCACAGCAG GCTTGATCGC CGGTGAATTG GTGGCCATCG ACGGCAGCAA GTTTCAGGCG
GTCGCCTCCT CACGGCGTCA TGTGAATTTG AAGCAGCTCA AGCGCCAGGA AGAAAAACTG
GATAAGCGCA TCGCTCAGTA TCTGGCCGAG CTGGATGAGG CCGACAAGGC TGAAACCACA
GATTCAATTG ATCGCAGCGC AATCAAAGCA GCACTGGCAC AGCTTGAGGC TCGACAACAG
GATAATCAGA GTTGCCAGGC ACTGATGCGT TCGATGGGCA TCGAGCAGTT CAACACTCAT
GAAAGCGATG CCCGAATGAT GCGCACGGCC AAAGGGCCAC GTGTGGCCTA CAACGTGCAA
ACCGTCGTGG ACGCCGAGCA TTGCCTGATT TTGCATCATG AGGTCACCCA GGATGGCGAT
GACCGAAAGC AACTGGAGCC GATGGCCAAG GCCGCCAAAG CAGAGTTACA GCAAGATGAG
CTGACGGTCA CTGCCGATGC CGGCTACTCC AATGGCAAGC AGTTTCAGGC CTGCGAGGAT
GCTTCGATTA CGGCCTATGT ACCGCCCAAT CGTTCGAAAA ACCCTGGCAG TCATGAAGAG
CAGCTCTTTG AGCGAAAAGA CTTTATCTAT GAGGCCGGAC ACGATCGTTT CCAGTGTCCG
GCAGGCAAAT GGTTAACGCT AAAACAGCAC AACAAAGGTG ATCGGATCTA TCAGGCTGAG
GTCGATGACT GCGCCAACTG CGCGCTGAAA ACGCAATGCA CTCGAGCCCA GCGCCGTTAT
GTCTCACGAC ATGCCCATGA AGAGGCTTTC GAGCGGATGG AGCAAAGAAT GCAGGCGCAT
CCTGAGATGA TGGCCAACCG AAGATCCATC GTTGAGCACC CCTTCGGCAA CCTCAAGCAA
TGGCTATTTG GTAATGGCCG TTTCTTGCTG CGACAACTGG AGGGGACAAA AGCTGAAATG
GCCTTGGCGG TGAATGCTTA TAACCTGAAA CGAGCGATTA AAGTGCTCGG TGTGCGCCAT
CTGATGGCTT TGATGGGCTG A
 
Protein sequence
MLRIERYRAF FVMAYIQGES RSQTSLFPVS LEELIPEDHL VRVIDLYVAK LDLVQLGFDK 
AIPKSTGRPA YDPADQLKLY LYGYFQRIRS SRRLEAECQR NIEVMWLINR LKPDFKTIAD
FRKNNKPAFI ATCRAFVRFC RTAGLIAGEL VAIDGSKFQA VASSRRHVNL KQLKRQEEKL
DKRIAQYLAE LDEADKAETT DSIDRSAIKA ALAQLEARQQ DNQSCQALMR SMGIEQFNTH
ESDARMMRTA KGPRVAYNVQ TVVDAEHCLI LHHEVTQDGD DRKQLEPMAK AAKAELQQDE
LTVTADAGYS NGKQFQACED ASITAYVPPN RSKNPGSHEE QLFERKDFIY EAGHDRFQCP
AGKWLTLKQH NKGDRIYQAE VDDCANCALK TQCTRAQRRY VSRHAHEEAF ERMEQRMQAH
PEMMANRRSI VEHPFGNLKQ WLFGNGRFLL RQLEGTKAEM ALAVNAYNLK RAIKVLGVRH
LMALMG