Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1476 |
Symbol | rplS |
ID | 1183113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1620789 |
End bp | 1621139 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637392849 |
Product | ribosomal protein L19 |
Protein accession | NP_791302 |
Protein GI | 28868683 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0335] Ribosomal protein L19 |
TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0735287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACA AAATCATTCT TGCCCTCGAA GCAGAGCAGA TGACCAAAGA GATCCCTACC TTTGCACCAG GCGACACCAT CGTCGTCCAG GTTAAAGTGA AGGAAGGCGA CCGCGCTCGT CTGCAAGCAT TCGAAGGCGT TGTCATTGCC AAGCGTAACC GTGGCGTGAA CAGTGCTTTC ACTGTTCGTA AAATCTCCAA CGGTGTTGGC GTTGAGCGTA CTTTCCAGAC TTACAGCCCG CAAATCGACA GCATGGCTGT GAAACGTCGC GGTGACGTTC GCAAGGCCAA ACTGTACTAC CTGCGTGACC TGTCCGGTAA AGCAGCGCGC ATCAAGGAAA AACTGTCCTG A
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Protein sequence | MTNKIILALE AEQMTKEIPT FAPGDTIVVQ VKVKEGDRAR LQAFEGVVIA KRNRGVNSAF TVRKISNGVG VERTFQTYSP QIDSMAVKRR GDVRKAKLYY LRDLSGKAAR IKEKLS
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