| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1472 |
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| Symbol | ffh |
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| ID | 1183109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1617559 |
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| End bp | 1618935 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392845 |
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| Product | signal recognition particle protein Ffh |
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| Protein accession | NP_791298 |
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| Protein GI | 28868679 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0337411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ATCTGACTGA CCGCCTCTCA CAGACGCTGC GCCACGTTAC TGGCAAGGCC
AAGCTGAACG AGGACAACAT CAAAGATACC TTGCGCGAAG TGCGTATGGC GTTGCTCGAA
GCCGACGTCG CCTTGCCGGT GGTCAAAGAC TTCGTCAACA GCGTCAAGGA GCGTGCTGTC
GGCACCGAGG TGTCGCGCAG CCTGACGCCG GGCCAGGCGT TCGTGAAGAT CGTCCAGGCC
GAACTCGAAA GCCTGATGGG CGCCGCCAAC GAAGACCTGG TGCTCAATGT CACGCCGCCT
GCGGTCATCC TCATGGCTGG CTTGCAGGGT GCGGGCAAGA CCACCACTGC CGGCAAGCTG
GCGCGGTTCC TTAAAGAGCG CAAAAAGAAA ACCGTGATGG TGGTGTCGGT CGACGTTTAC
CGTCCCGCCG CCATCAAGCA GCTTGAAACC CTGGCCAACG ACATCGGCGT GACGTTCTTC
GCGTCCGACA TCAGCCAGAA GCCGGTGGAC ATCGCCCTGG CTGCCATCAA GGAAGCCAGG
CTGAAGTTCA TCGACGTGGT CATCGTCGAT ACCGCCGGTC GTCTGCACGT CGATGTCGAG
ATGATGGGCG AGATCCAGGC GCTGCACGCT GCGACCAAGC CAGCCGAAAC GCTGTTCGTG
GTCGATGCCA TGACCGGTCA GGATGCGGCC AACACCGCCA AGGCATTCGG CGATGCGCTG
CCGCTGACCG GTGTCATCCT GACCAAGGTC GACGGTGATG CTCGTGGCGG TGCTGCACTG
TCGGTGCGTG CAATCACCGG CAAGCCGATC AAGTTCATCG GTATGGGCGA GAAGAGCGAG
GCGCTGGAGC CGTTCCACCC GGACCGTATC GCTTCGCGAA TCCTCGGCAT GGGCGACGTG
CTCAGTCTGA TCGAGCAGGC CGAACAGACC CTCGACAAGG ACAAAGCCGA CAAACTGGCG
AAAAAACTCA AGAAGGGCAA AGGCTTCGAT CTCGAAGACT TCCGCGACCA GTTGCAGCAG
ATGAAAAACA TGGGCGGCCT TGGTGGCCTC ATGGACAAAC TGCCAAGCAT CGGCGGCGTC
AACCTGTCGC AGATGGGCAA CGCCCAGGGC GCAGCCGAGA AACAGTTCAA GCAGATGGAA
GCGATCATCA ACTCGATGAC GCCAGCCGAG CGCCGCGACC CGGACCTGAT CAGCGGCTCG
CGCAAGCGCC GTATCTCTCA GGGGTCGGGC ACTCAGGTTC AGGATATCGG GCGTCTGATC
AAGCAGCACA AACAGATGCA GAAGATGATG AAGAAGTTCT CCGCCAAGGG CGGAATGGCG
AAAATGATGC GCGGCATGGG TGGAATGCTC CCCGGCGGCG GCATGCCGAA AATGTAA
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| Protein sequence | MFENLTDRLS QTLRHVTGKA KLNEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKERAV
GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLVLNVTPP AVILMAGLQG AGKTTTAGKL
ARFLKERKKK TVMVVSVDVY RPAAIKQLET LANDIGVTFF ASDISQKPVD IALAAIKEAR
LKFIDVVIVD TAGRLHVDVE MMGEIQALHA ATKPAETLFV VDAMTGQDAA NTAKAFGDAL
PLTGVILTKV DGDARGGAAL SVRAITGKPI KFIGMGEKSE ALEPFHPDRI ASRILGMGDV
LSLIEQAEQT LDKDKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPSIGGV
NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS RKRRISQGSG TQVQDIGRLI
KQHKQMQKMM KKFSAKGGMA KMMRGMGGML PGGGMPKM
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