Gene PSPTO_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1441 
Symbol 
ID1183078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1580261 
End bp1581052 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID637392814 
Producthydrolase, carbon-nitrogen family 
Protein accessionNP_791267 
Protein GI28868648 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATA TAAGCGAGCT GCCAAACCTG AACATCGCGC TGATTCAGAC GACTCTGGCG 
TGGCATGACC GCGAAGCCAA TTTCGAACAT TTCGAGCCGT TGCTGGATCA GGCGCAAGGT
GTCGATCTGG TGATCCTGCC TGAAATGTTC ACCACCGGGT TTTCGATGGA GTCCGAGATG
CTGGCGGAAC CGGAGGCTGG GCCGACATCG ACGTGGTTAC TGGCACAAGC CAAGCGCATC
AATGCGGTTG TGACCGGCAG TGTGATTATT CGCGACGCCG ATGGCAGTCA TCGTAACCGC
CTGCTGTGGG CGCGGCCGGA TGGCGAGTTG TTGCACTACG ACAAGCGCCA CCTGTTTCGC
ATGGCCAGCG AGCACGAGCA CTACACGCCG GGCGAGCGCC AGGTGACGTT TGAGCTCAAT
GGTTGGCGTA TCCGGCCGCT GATCTGCTAC GACCTGCGTT TCCCGGTATG GAGCCGTGAT
GCAGAGGGTA CGGACCTGTT GCTGTACACC GCCAACTGGC CCGGCGCTCG ACGTTTGCAC
TGGAACCGGT TGCTACCTGC CAGGGCGATT GAAAACCTGT GTTACGTTGC GGCGGTCAAT
CGGGTCGGGT CTGACGGCAA GGGCTTCGCG TACACCGGTG ACAGTCAGGT TCTGGATTTT
CAGGGTGAGA GCCTGTTGGG CGTGGGAGAA GCTGACGGCG TCTTTCGCGC AACACTGAGT
GCCTCGGACC TGCAGGCCTA TCGCACGCGC TTTCCAGCAG GGCTGGACGC TGACTCTTTT
AATATTCAAT AA
 
Protein sequence
MRDISELPNL NIALIQTTLA WHDREANFEH FEPLLDQAQG VDLVILPEMF TTGFSMESEM 
LAEPEAGPTS TWLLAQAKRI NAVVTGSVII RDADGSHRNR LLWARPDGEL LHYDKRHLFR
MASEHEHYTP GERQVTFELN GWRIRPLICY DLRFPVWSRD AEGTDLLLYT ANWPGARRLH
WNRLLPARAI ENLCYVAAVN RVGSDGKGFA YTGDSQVLDF QGESLLGVGE ADGVFRATLS
ASDLQAYRTR FPAGLDADSF NIQ