Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1441 |
Symbol | |
ID | 1183078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1580261 |
End bp | 1581052 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392814 |
Product | hydrolase, carbon-nitrogen family |
Protein accession | NP_791267 |
Protein GI | 28868648 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGATA TAAGCGAGCT GCCAAACCTG AACATCGCGC TGATTCAGAC GACTCTGGCG TGGCATGACC GCGAAGCCAA TTTCGAACAT TTCGAGCCGT TGCTGGATCA GGCGCAAGGT GTCGATCTGG TGATCCTGCC TGAAATGTTC ACCACCGGGT TTTCGATGGA GTCCGAGATG CTGGCGGAAC CGGAGGCTGG GCCGACATCG ACGTGGTTAC TGGCACAAGC CAAGCGCATC AATGCGGTTG TGACCGGCAG TGTGATTATT CGCGACGCCG ATGGCAGTCA TCGTAACCGC CTGCTGTGGG CGCGGCCGGA TGGCGAGTTG TTGCACTACG ACAAGCGCCA CCTGTTTCGC ATGGCCAGCG AGCACGAGCA CTACACGCCG GGCGAGCGCC AGGTGACGTT TGAGCTCAAT GGTTGGCGTA TCCGGCCGCT GATCTGCTAC GACCTGCGTT TCCCGGTATG GAGCCGTGAT GCAGAGGGTA CGGACCTGTT GCTGTACACC GCCAACTGGC CCGGCGCTCG ACGTTTGCAC TGGAACCGGT TGCTACCTGC CAGGGCGATT GAAAACCTGT GTTACGTTGC GGCGGTCAAT CGGGTCGGGT CTGACGGCAA GGGCTTCGCG TACACCGGTG ACAGTCAGGT TCTGGATTTT CAGGGTGAGA GCCTGTTGGG CGTGGGAGAA GCTGACGGCG TCTTTCGCGC AACACTGAGT GCCTCGGACC TGCAGGCCTA TCGCACGCGC TTTCCAGCAG GGCTGGACGC TGACTCTTTT AATATTCAAT AA
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Protein sequence | MRDISELPNL NIALIQTTLA WHDREANFEH FEPLLDQAQG VDLVILPEMF TTGFSMESEM LAEPEAGPTS TWLLAQAKRI NAVVTGSVII RDADGSHRNR LLWARPDGEL LHYDKRHLFR MASEHEHYTP GERQVTFELN GWRIRPLICY DLRFPVWSRD AEGTDLLLYT ANWPGARRLH WNRLLPARAI ENLCYVAAVN RVGSDGKGFA YTGDSQVLDF QGESLLGVGE ADGVFRATLS ASDLQAYRTR FPAGLDADSF NIQ
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