| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1413 |
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| Symbol | tgt |
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| ID | 1183050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1553058 |
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| End bp | 1554173 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392786 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | NP_791239 |
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| Protein GI | 28868620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.786795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCG AGTTGTTGGC CACCGACGGC AAGGCCCGTC GCGGTCGCCT GACCTTTCCG
CGTGGCGTGG TCGAGACCCC GGCGTTCATG CCGGTGGGCA CCTACGGCAC GGTCAAGGGC
ATGTTGCCGC GTGATATCGA GGCCACCGGT GCGCAGATGA TTCTGGGCAA CACCTTCCAC
TTGTGGCTGC GTCCGGGCAC CGAGGTCATC AAGGGCCACG GCGACCTGCA CGATTTCATG
CAGTGGAAAG GGCCGATTCT GACCGACTCT GGCGGTTTTC AGGTGTTCAG CCTGGGCGCC
ATGCGCAAGA TCAAGGAGGA GGGCGTGACC TTCGCCTCTC CGGTCGATGG TGCCAAGGTG
TTCATGGGCC CGGAAGAGTC GATGCAGGTC CAGCGTGACC TGGGTTCGGA CGTCGTGATG
ATTTTCGATG AGTGCACGCC GTACCCGGCC GACGAAGACG TAGCACGTGT CTCCATGGAG
CTGTCGTTGC GCTGGGCCAA GCGCTCCAAG GTCGCGCACG GCGAAAACAC TGCCGCGCTG
TTCGGCATTG TTCAGGGTGG CATGCACGAG AACCTGCGCA AGCGTTCGCT CGAAGGCCTG
GATGAGATCG GCTTTGACGG CCTGGCGATT GGCGGTCTGT CGGTGGGCGA GCCCAAGCAC
GAGATGATCA AGGTGCTGGA TTACCTGCCG GGCCTTATGC CAGCAGACAA ACCTCGTTAC
TTGATGGGTG TAGGCAAGCC CGAAGATCTG GTCGAAGGTG TGCGCCGTGG CGTTGATATG
TTCGATTGTG TCATGCCGAC CCGCAACGCC CGCAACGGCC ACCTGTTCAT CGATACCGGT
GTGCTGAAAA TCCGTAACGC GTTCCATCGC CACGACAATA CGCCGCTGGA TCCGACCTGC
GATTGCTACA CCTGCAAGAA CTTCTCGCGT GCTTATCTGC ATCACCTGGA CAAGTGCGGC
GAAATGCTGG GGAGCATGCT CAATACGATC CACAATTTGC GGCACTACCA GCTGCTCATG
GCTGGTTTGC GTGAGGCTAT TCAACAGGGT ACATTGGCCG CCTTCGTCGA TGCCTTCTAT
GCCAAACGCG GCCTTCCAAC GCCGCCTCTG GGTTGA
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| Protein sequence | MSFELLATDG KARRGRLTFP RGVVETPAFM PVGTYGTVKG MLPRDIEATG AQMILGNTFH
LWLRPGTEVI KGHGDLHDFM QWKGPILTDS GGFQVFSLGA MRKIKEEGVT FASPVDGAKV
FMGPEESMQV QRDLGSDVVM IFDECTPYPA DEDVARVSME LSLRWAKRSK VAHGENTAAL
FGIVQGGMHE NLRKRSLEGL DEIGFDGLAI GGLSVGEPKH EMIKVLDYLP GLMPADKPRY
LMGVGKPEDL VEGVRRGVDM FDCVMPTRNA RNGHLFIDTG VLKIRNAFHR HDNTPLDPTC
DCYTCKNFSR AYLHHLDKCG EMLGSMLNTI HNLRHYQLLM AGLREAIQQG TLAAFVDAFY
AKRGLPTPPL G
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