| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1371 |
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| Symbol | |
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| ID | 1183007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1506530 |
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| End bp | 1507474 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392743 |
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| Product | conserved effector locus protein |
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| Protein accession | NP_791198 |
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| Protein GI | 28868579 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3781] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0841301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGTC CTTTCGAGAA AAAATGGCGG TGTTTCACCC GAACCGTGAC CTACGTTGGC
TGGTCGCTGT TCTGGCTTCT GCTCTGGGAC GTGGCCGTCA CCGTGGACGT CATGCTGATA
GAAGGCAAAG GCATCGACTT CCCCCTGATG CCCCTCACGT TGCTTTGCTC GGCACTGATC
GTGCTGATCA GCTTTCGCAA CTCGAGTGCC TATAACCGTT GGTGGGAAGC GCGCACCTTG
TGGGGCGCAA TGGTCAACAC TTCACGCAGT TTTGGCCGGC AGGTACTGAC GCTGATCGAT
GGCGAACGGG ATGACCTCAA CAACCCTGTC AAAGCCATAC TCTTTCAACG TCATGTGGCT
TACTTGCGTG CCCTGCGCGC GCACCTCAAA GGCGACGTCA AAACAGCAAA ACTCGACGGG
TTACTGTCGC CCGACGAGAT TCAGCGCGCC AGCCAGAGCA ACAACTTCCC CAATGACATC
CTCAATGGCT CTGCTGCGGT TATCTCGCAA GCCTTTGCCG CCGGCCAGTT CGACAGCATC
CGTCTGACCC GCCTGGAATC GACCATGGTC GATCTGTCCA ACTGTCAGGG CGGCATGGAG
CGCATCGCCA ACACGCCACT GCCCTACCCC TACGTTTATT TCCCACGGCT GTTCAGCACG
CTGTTCTGCA TCCTGATGCC GCTGAGCATG GTCACCACCC TGGGCTGGTT CACCCCGGCG
ATCTCCACGG TGGTAGGCTG CATGCTGCTG GCAATGGACC GCATCGGTAC AGACCTGCAA
GCCCCGTTCG GCAACAGTCA GCACCGGATC CGCATGGAAG ACCTGTGCAA CACCATCGAA
AAGAACCTGC AATCGATGTT CTCTTCGCCA GAGAGGCAGC CGCTGCTGGC TGACCTGAAA
GCCCCGTACC GTGGCGCGTG GCCAACGCAT CAATTGGCGG TCTGA
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| Protein sequence | MSGPFEKKWR CFTRTVTYVG WSLFWLLLWD VAVTVDVMLI EGKGIDFPLM PLTLLCSALI
VLISFRNSSA YNRWWEARTL WGAMVNTSRS FGRQVLTLID GERDDLNNPV KAILFQRHVA
YLRALRAHLK GDVKTAKLDG LLSPDEIQRA SQSNNFPNDI LNGSAAVISQ AFAAGQFDSI
RLTRLESTMV DLSNCQGGME RIANTPLPYP YVYFPRLFST LFCILMPLSM VTTLGWFTPA
ISTVVGCMLL AMDRIGTDLQ APFGNSQHRI RMEDLCNTIE KNLQSMFSSP ERQPLLADLK
APYRGAWPTH QLAV
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