Gene PSPTO_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1368 
Symbol 
ID1183004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1504444 
End bp1504731 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content54% 
IMG OID637392740 
Productlipoprotein, putative 
Protein accessionNP_791195 
Protein GI28868576 
COG category[R] General function prediction only 
COG ID[COG5645] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00111167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA AATGCCTGCT ACTGGTTATA TCAATGTCAC TTGGCGGCTG CTGGAGCCTG 
ATGATTCATC TGGACGGCGA GCGTTGCATC TATCCCGGCA CTCGCCAAGG TTGGGCGTGG
GGAACCCATA ACGGAGGGCA GAGTTGGCCC ATACTTATAG ACGTGCCGTT TTCCCTCGCG
TTGGACACAC TGCTGCTGCC CTACGACCTC ACCGCTTTTC TGCCCGAAAA TCTTGGCGGT
GATGACCGCA AATGTCAGTT CAGTGGAGGA TTGAACGTGC TCGGTTGA
 
Protein sequence
MLKKCLLLVI SMSLGGCWSL MIHLDGERCI YPGTRQGWAW GTHNGGQSWP ILIDVPFSLA 
LDTLLLPYDL TAFLPENLGG DDRKCQFSGG LNVLG