Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1368 |
Symbol | |
ID | 1183004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1504444 |
End bp | 1504731 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637392740 |
Product | lipoprotein, putative |
Protein accession | NP_791195 |
Protein GI | 28868576 |
COG category | [R] General function prediction only |
COG ID | [COG5645] Predicted periplasmic lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00111167 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAA AATGCCTGCT ACTGGTTATA TCAATGTCAC TTGGCGGCTG CTGGAGCCTG ATGATTCATC TGGACGGCGA GCGTTGCATC TATCCCGGCA CTCGCCAAGG TTGGGCGTGG GGAACCCATA ACGGAGGGCA GAGTTGGCCC ATACTTATAG ACGTGCCGTT TTCCCTCGCG TTGGACACAC TGCTGCTGCC CTACGACCTC ACCGCTTTTC TGCCCGAAAA TCTTGGCGGT GATGACCGCA AATGTCAGTT CAGTGGAGGA TTGAACGTGC TCGGTTGA
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Protein sequence | MLKKCLLLVI SMSLGGCWSL MIHLDGERCI YPGTRQGWAW GTHNGGQSWP ILIDVPFSLA LDTLLLPYDL TAFLPENLGG DDRKCQFSGG LNVLG
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