Gene PSPTO_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1364 
Symbol 
ID1183000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1502395 
End bp1502811 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content54% 
IMG OID637392736 
Producthypothetical protein 
Protein accessionNP_791191 
Protein GI28868572 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGA CCGATCACTA TCGGGCTTAC ATCGCCTGTC TGAATGACCG TAGTTGGCAC 
CAGTTGGGCA ACTTCGTCGA TGACAATGTG CATTACAACG GTGAGCTGAT CAGCCTTTCC
GGCTACAAAA CAATGCTGGA AAACGACGTC AGGATTATCC CCGACTTGCG TTTCAAGATC
GATTTGCTGG TCGTTGAAGC ACCACAGGTC GCTGCCCGGC TGGTCTTCAA CTGCTCGCCA
CAGGGTCGAT TTCTGGGGCA GGACACACAG GGACGGCGCA TCACCTTTTC CGAAAATGTG
TTCTACACAT TCAGCGATGG CAAGATAATC GGCGTTTGGT CGGTAATCGA TAAAGCGGCA
GTGGAGCGTC AGCTTCGCGG TGAGTCGGCA GCGCTCTGCG CCGACAGACG CGTCTGA
 
Protein sequence
MNLTDHYRAY IACLNDRSWH QLGNFVDDNV HYNGELISLS GYKTMLENDV RIIPDLRFKI 
DLLVVEAPQV AARLVFNCSP QGRFLGQDTQ GRRITFSENV FYTFSDGKII GVWSVIDKAA
VERQLRGESA ALCADRRV