Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1364 |
Symbol | |
ID | 1183000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1502395 |
End bp | 1502811 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637392736 |
Product | hypothetical protein |
Protein accession | NP_791191 |
Protein GI | 28868572 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.646938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGA CCGATCACTA TCGGGCTTAC ATCGCCTGTC TGAATGACCG TAGTTGGCAC CAGTTGGGCA ACTTCGTCGA TGACAATGTG CATTACAACG GTGAGCTGAT CAGCCTTTCC GGCTACAAAA CAATGCTGGA AAACGACGTC AGGATTATCC CCGACTTGCG TTTCAAGATC GATTTGCTGG TCGTTGAAGC ACCACAGGTC GCTGCCCGGC TGGTCTTCAA CTGCTCGCCA CAGGGTCGAT TTCTGGGGCA GGACACACAG GGACGGCGCA TCACCTTTTC CGAAAATGTG TTCTACACAT TCAGCGATGG CAAGATAATC GGCGTTTGGT CGGTAATCGA TAAAGCGGCA GTGGAGCGTC AGCTTCGCGG TGAGTCGGCA GCGCTCTGCG CCGACAGACG CGTCTGA
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Protein sequence | MNLTDHYRAY IACLNDRSWH QLGNFVDDNV HYNGELISLS GYKTMLENDV RIIPDLRFKI DLLVVEAPQV AARLVFNCSP QGRFLGQDTQ GRRITFSENV FYTFSDGKII GVWSVIDKAA VERQLRGESA ALCADRRV
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