| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1313 |
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| Symbol | |
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| ID | 1182949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1444523 |
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| End bp | 1445275 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637392687 |
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| Product | pili assembly chaperone |
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| Protein accession | NP_791142 |
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| Protein GI | 28868523 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.654177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCTG ATTTTTTTCG CGCTGCGGTA GGTGTTGCGA TGGTGTCGTG GTGCGCCTCT
GTTCAGGCGG GCATTGTGTT GAACACCACA CGGGTTATTT ACCAGGGTAA TGACAAGGAG
GTCAGTCTGG GCGTTCACAA CAGTGGCGGG GGAGAGATTC TCCTGCAGTC CTGGCTAGAA
GCGCCGGCAC TTGCCACTGG CAATGACCCA GCCACCCAGC GCCTGCCATT TATCGTAACG
CCGTCACTGA CGCGCATGGC CGGCGGCGGC AAGCAACTGC TGCGCATTAT TCATTCCGGT
ACCGACATGT CCACCGATCG CGAGTCGGTA CTGTGGCTCA ATGTTCAGGA AATACCCCAG
ACTGCTGCGC AGAACACGTT GCAGATCGCA ATACGTCAGC GCATAAAAGT CTTTTTCCGG
CCTGACGGAA TGCCGGGTGA TCCACTGCAA GCACCCGAGC AGTTGAACTG GAAAACGGGG
AATAACGACA GTCTGCAAGT CGAAAATCCA GGTCCTTATC ATGTTTCCAT GCTGAAGATT
TCCGTGCGTC AGGATGACGT CGAACTGGCC AGTATCGAGA GTCAGATGTT GGCGCCGCAG
CAGAGTCTGC ACATCCCGTT ATTGCGCAAA AAGGGGGGGG CACCGCTGGT GGTGAGTTTT
GTCAGTATCA ATGATTACGG CGGACAAGTG CCTTATCGCG CAACACTTGC CAATCACGAG
TCGGGCTATG CCAGCAAGGT CATGCCTCGA TAG
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| Protein sequence | MYSDFFRAAV GVAMVSWCAS VQAGIVLNTT RVIYQGNDKE VSLGVHNSGG GEILLQSWLE
APALATGNDP ATQRLPFIVT PSLTRMAGGG KQLLRIIHSG TDMSTDRESV LWLNVQEIPQ
TAAQNTLQIA IRQRIKVFFR PDGMPGDPLQ APEQLNWKTG NNDSLQVENP GPYHVSMLKI
SVRQDDVELA SIESQMLAPQ QSLHIPLLRK KGGAPLVVSF VSINDYGGQV PYRATLANHE
SGYASKVMPR
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