Gene PSPTO_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1261 
Symbol 
ID1182897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1383842 
End bp1384366 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID637392636 
Producthypothetical protein 
Protein accessionNP_791091 
Protein GI28868472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.190288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGGAT CATTCGCCAA GGGATTTGCA TGCATGAGCT ACGAAGAACA AAGCCAGGCC 
AACAGCGCCC TCATCACCCG CTTTTATGGG GCATTCGCTC AGCTGGATGC CGAGGCGATG
AGCGCCTGCT ACAGCGACGA TGTGCTGTTC AGCGATCCGG CGTTCGGTGA GTTGCGTGGC
CCTCAGGTGG GCGACATGTG GCGCATGCTG ACTTCTCGGG CGAAGCACTT TTCGGTGGTC
TTCGATCAGG TGCGTGCCGA TGACCGCACG GGCAGCGCGC ACTGGGTGGC GACCTACCTG
TTCAGTCAGA CCGGGCGCAC GGTGGTCAAC GATATCCAGG CCCGTTTCGT GTTTCGCGAT
GGCAAGATCT GCGAACACCA CGACCATTTC GACATGTGGC GTTGGTCGCG TCAGGCGCTG
GGTGCAAAAG GCCTGTTGCT CGGCTGGACA CCGCTGGTGC GTAACGCGGT TCGCGTCCAG
GCGCTCAAGG GCCTGAAAGC CTTCACCGAG AGCCGCCGTG CCTGA
 
Protein sequence
MHGSFAKGFA CMSYEEQSQA NSALITRFYG AFAQLDAEAM SACYSDDVLF SDPAFGELRG 
PQVGDMWRML TSRAKHFSVV FDQVRADDRT GSAHWVATYL FSQTGRTVVN DIQARFVFRD
GKICEHHDHF DMWRWSRQAL GAKGLLLGWT PLVRNAVRVQ ALKGLKAFTE SRRA