Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1261 |
Symbol | |
ID | 1182897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1383842 |
End bp | 1384366 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392636 |
Product | hypothetical protein |
Protein accession | NP_791091 |
Protein GI | 28868472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.190288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACGGAT CATTCGCCAA GGGATTTGCA TGCATGAGCT ACGAAGAACA AAGCCAGGCC AACAGCGCCC TCATCACCCG CTTTTATGGG GCATTCGCTC AGCTGGATGC CGAGGCGATG AGCGCCTGCT ACAGCGACGA TGTGCTGTTC AGCGATCCGG CGTTCGGTGA GTTGCGTGGC CCTCAGGTGG GCGACATGTG GCGCATGCTG ACTTCTCGGG CGAAGCACTT TTCGGTGGTC TTCGATCAGG TGCGTGCCGA TGACCGCACG GGCAGCGCGC ACTGGGTGGC GACCTACCTG TTCAGTCAGA CCGGGCGCAC GGTGGTCAAC GATATCCAGG CCCGTTTCGT GTTTCGCGAT GGCAAGATCT GCGAACACCA CGACCATTTC GACATGTGGC GTTGGTCGCG TCAGGCGCTG GGTGCAAAAG GCCTGTTGCT CGGCTGGACA CCGCTGGTGC GTAACGCGGT TCGCGTCCAG GCGCTCAAGG GCCTGAAAGC CTTCACCGAG AGCCGCCGTG CCTGA
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Protein sequence | MHGSFAKGFA CMSYEEQSQA NSALITRFYG AFAQLDAEAM SACYSDDVLF SDPAFGELRG PQVGDMWRML TSRAKHFSVV FDQVRADDRT GSAHWVATYL FSQTGRTVVN DIQARFVFRD GKICEHHDHF DMWRWSRQAL GAKGLLLGWT PLVRNAVRVQ ALKGLKAFTE SRRA
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