Gene PSPTO_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1252 
Symbol 
ID1182888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1374790 
End bp1375452 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID637392627 
Productlipoprotein, putative 
Protein accessionNP_791082 
Protein GI28868463 
COG category[S] Function unknown 
COG ID[COG4380] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCG CTTATCTGAA AGTGGCTGTC AGCCTGTTTG CCGTCGCCCT GTTGTCGGGT 
TGCGTTACTC CGCCGCCGAC GGTGGACTAC TCGGCCTTCA AGGAAAGCAA GCCGCGTTCG 
ATTCTGGTGC TGCCGCCGGT CAACGAATCG CCTGACGTCA AAGCGACGTA CAGCACCTTC 
GCGCAGGTGA CCTATCCGCT GGCCGAGTCA GGTTACTACG TGTTGCCGGT GGCGCTGGTT 
GACGAGACGT TTCGCAACAA CGGTCTGACC AACGCCAACG ATATTCAGGC CACATCGCCT 
GCCAAGCTGC GCGAGATCTT CGGCGCCGAT GCCGCGCTGT ACATCACGGT CAAGCAATAC 
GGCACCAGTT ACGTGGTCAT CAGCAGCCAG ACCGTCGTGA CGGTCACGGC AAAACTGGTT 
GATCTGCGCA CCGGAACTGC GTTGTGGACA GGCGCCGCTT CCGCTTCCAG TGAAGAGGGA 
GGCAACAATA GCGGCGGCGG TCTGGTGGGC ATGCTGATCA CCGCAGCGGT CAAGCAGATC 
ATCAACAGCG CTACCGATGC CGGTGACCCC ATTGCCGGGA TAGCCAGCAA CCGACTGCTT 
ACAGCGGGTC GGCCGGCGGG TTTGCTGTAC GGCCCGCGTT CGCCGAAGTA CGGCAGTGAC 
TGA
 
Protein sequence
MNLAYLKVAV SLFAVALLSG CVTPPPTVDY SAFKESKPRS ILVLPPVNES PDVKATYSTF 
AQVTYPLAES GYYVLPVALV DETFRNNGLT NANDIQATSP AKLREIFGAD AALYITVKQY 
GTSYVVISSQ TVVTVTAKLV DLRTGTALWT GAASASSEEG GNNSGGGLVG MLITAAVKQI 
INSATDAGDP IAGIASNRLL TAGRPAGLLY GPRSPKYGSD