| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1206 |
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| Symbol | |
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| ID | 1182842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1318800 |
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| End bp | 1321301 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392583 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_791038 |
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| Protein GI | 28868419 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.843883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTC CCGCCCGTTC GCTGCACCCC TTGGCACTTG CCGTACTGAT GGCCTGTGCA
GCGATGCCGT CGCACGCCGC CCAGCCTTCG TCGCCGAATG CAGACGTCAG TACGGTGCGC
AGTTTCTCGA TACCGGCCGG GGATTTGAGC CAGGTGCTCA ATACGTTTTC GGAGCAGGCG
GGCCTTGCGC TGGCGTTCGA CCCGGCGCTT ACCCGGGGTA AACGCAGCCC CGGTTTGCAG
GGGCAGTACG GCACCGACGA GGCGATTGCC CGCTTGCTGA GCGGCAGCGG TTTGCGCGCC
ACGGCATTGT CGGCCAACCG CTATCGCATC GAGACCGCGC CCGAGGCGGT GGAGGGGTCG
CTGGAATTGC AGGCGACCAC CATCAGCGGC GCGTCCCGGC TGGAGACCGC TACGGGGCCT
GTAACCGGTT ATGTGGCGAC GCGTGGCCTC TCGGCGACCA AGACCGACAC TGCGCTGATC
GAAACCCCGC AGTCGATCTC GGTGGTGACC AAAGACCAGA TGAAAGCTCA GGGCGCGGAG
AACCTCAGCC AGATGTTGCG CTATAGCGCC GCCGTGGTGC CCGAGACACG TGGCTCGACG
GCTTCGCGTC TGGACATGCT GAGCATCCGC GGTTTTTCGC CTGCGCTGTA TCTGGACGGG
CTGCGCATGC CGGACAACCG TGATGCCGCG CCACAGAAAG ACGTGTTCGA TCTGGAGCGT
GTGGAAGTGC TGCGTGGTCC TGCGTCGGTG CTGTACGGTC AGGCCAGCCC CAGTGGTGTG
GTGAACATGG TCAGCAAATT GCCCACCGAG ACGCCGTTCC ATGAGATCGG TCTGACGTAT
GGCACCTTCA ACAAGAAGCG CACCACGTTC GATTTTGGCG GGCCGATTGA TGATCAGGGT
GTTTATTCCT ATCGCCTGTC CGGGCTATAC GACGATGCCG ATGGCCAGAT CGAACACACC
GAAACCCGTC GCCAGTCACT GGCCTCGGCG TTCACCTGGC GGCCCGACGA GGACACTTCG
CTGACCCTGC TGGCCAATCT GCAGAGCGAT CCCAAGGGGG CTTCCTACGG ATCGATGCCG
GCCTATGGTT CGGTGGTAAA AAGCCCGACC GGGCGGCACA TCGATTTCGA TTTCTATGAT
GGCGAGAAGA ATTTCGAGAA GAGCGACCGT GAATATCACG CCGTCGGTTA TCTGTTCGAG
CACCATCTGA ACGACGTCTG GACCTTGCGC CAGAACGCCC GCTATCTGCG CAGCGAAGGG
GTTTACCGAA GCATCTACAA CGGCTGGGGC ACGTTGCAGC CTGACTATCG CACCTCCGAA
CGCGCCACCA TCGCCACCGA TGTGAATCTG GATTCCTACA CCATCGATAA CCAGATGCAG
GCCAATTTCG ACACCGGCCC GTTGCAGCAC ACGCTATTGC TGGGTGCGGA TTATCAGAAC
ACCAGCACTG ATACCAAAGC GGGTTACGGC ATAGGGCCAA CGCTGGACAT TTTCGACCCG
GTCTATGGCT CGCCTGTCGA GGTTCCAGCC TTTACCGAGT CGAGCACACA GCGTGATCAG
CAGAAGGGCC TGTACCTGCA AGAGCAGTTG AAGTGGGACA AGTGGGTGCT GTTGATGGGC
GGCCGTTACG ACTGGGCCGA GAGCAGCAAC AGTTCTACCA ACCTGACTTC AAGCACCAAG
ACCCGGTCTT CGGCCGACAG CGAAGCGTTC ACCGGGCGTC TGGGATTGGT TTACCTGTTT
GATAACGGCC TGGCGCCTTA CATCAGTTAT TCGGAATCCT TCGAGCCACA AAGCGGTACG
GGGCTGGGCG GTGCGCTGTT CGATCCGACC GAGGGCACGC AATACGAGCT GGGTATCAAG
TACCAGCCGC CCGGCAGCAA CAGCTTTATC ACGGCGGCGA TTTTCGACCT GCGTCGTTCC
AATGTGCTGA GCCAGGACCC CAATGGCAAC CTGTGCAACG GCGCGGTCTG TCAGGTGCAG
ACCGGTGAAG TGCAATCGCG TGGTTTCGAG CTGGAAGGCA AGGCCAGTTT GAACGACAAC
CTGGACATCA CTGCGGCGTA CGCCTATCTC GACAACCGGG TGACCAAGTC CAGCAACGTG
GTCAATGTCA CGTCCGGCAT CATCGGCGAT GCGCCAGGTC CTGATCTGAC CACCAAAGGC
ACCACGGCAC CGGCCATTCC ACGCCACACC GCCTCGGCGT GGGTGGATTA CACGGTTCAT
GACGGGCAGT TGAAAGGTGC TGGTGTGGGT GGCGGCGCAC GTTATGTGGG CGCGAGTTGG
GGGGATGAAG CCAACACCCT GAAGGTGCCG GGTTACACGC TGTTCGATGC CGCCGTGCAT
TACGACATTC CGAACATCAG CAACGCGATG GACAACCTGC GCCTGGCGCT GAATGTCACC
AATCTCGCCA ACAAGGAGTA CGTTGCGTCG TGCTACACCT ACTCATGGTG CTGGTACGGC
TCGCAACGCA CTGTGCAGGC GAGTGCTACG TATCGGTGGT GA
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| Protein sequence | MPRPARSLHP LALAVLMACA AMPSHAAQPS SPNADVSTVR SFSIPAGDLS QVLNTFSEQA
GLALAFDPAL TRGKRSPGLQ GQYGTDEAIA RLLSGSGLRA TALSANRYRI ETAPEAVEGS
LELQATTISG ASRLETATGP VTGYVATRGL SATKTDTALI ETPQSISVVT KDQMKAQGAE
NLSQMLRYSA AVVPETRGST ASRLDMLSIR GFSPALYLDG LRMPDNRDAA PQKDVFDLER
VEVLRGPASV LYGQASPSGV VNMVSKLPTE TPFHEIGLTY GTFNKKRTTF DFGGPIDDQG
VYSYRLSGLY DDADGQIEHT ETRRQSLASA FTWRPDEDTS LTLLANLQSD PKGASYGSMP
AYGSVVKSPT GRHIDFDFYD GEKNFEKSDR EYHAVGYLFE HHLNDVWTLR QNARYLRSEG
VYRSIYNGWG TLQPDYRTSE RATIATDVNL DSYTIDNQMQ ANFDTGPLQH TLLLGADYQN
TSTDTKAGYG IGPTLDIFDP VYGSPVEVPA FTESSTQRDQ QKGLYLQEQL KWDKWVLLMG
GRYDWAESSN SSTNLTSSTK TRSSADSEAF TGRLGLVYLF DNGLAPYISY SESFEPQSGT
GLGGALFDPT EGTQYELGIK YQPPGSNSFI TAAIFDLRRS NVLSQDPNGN LCNGAVCQVQ
TGEVQSRGFE LEGKASLNDN LDITAAYAYL DNRVTKSSNV VNVTSGIIGD APGPDLTTKG
TTAPAIPRHT ASAWVDYTVH DGQLKGAGVG GGARYVGASW GDEANTLKVP GYTLFDAAVH
YDIPNISNAM DNLRLALNVT NLANKEYVAS CYTYSWCWYG SQRTVQASAT YRW
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