Gene PSPTO_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1191 
Symbol 
ID1182827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1303986 
End bp1304789 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID637392568 
Producthypothetical protein 
Protein accessionNP_791023 
Protein GI28868404 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.50461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAC GTCAGCATTG CCTGACCTGC CTGCAACAGA CGCCGCCCTC GGTGTTTGAA 
GCGGCCTTGT GGGTATCGGC AGAACACGAC GCGCACTTTG CGCGCCATGA GGTGATGAGC
GAGATGGACC AGTTGCAGCG TCAGGTCGGC GCAGCCCTGC CGGTCCTGCC CGCTGCCGAA
CTCGCACAAC CGCTGTTGCG ACAACTCAGC GCCCTGGGCT TTCAACAGGA TGACTGGAAC
CCTCCGAAAC CTGACTCCGC ACTGCTGCAC AAAATCGTGC AGCAACGACG CGGGCAGCCA
TTGGGCCTGG CATTGATTGC AATGGAGATC GCACGACGGC TGGACATCGC ACTGGAGGGC
GTCAACTTTC CCGGCCACTT TCTGCTCCGC GTGCCGGGTG CCGACCATGT GCTCGACCCT
TGCGGCGGGC GCAGGCTGTA CCCCAAAGAC TGCCGCGAGC TGCTGATCCG CCAGTTCGGC
CCGACCCTGC AACTGCACGT CGAACACATG AAGCGCGCCA CACCGACCCA TATGCTGCAG
CGCTTGTCGC GCAATCTGCG CCACCTGCAT CAGCTCAACG ATGACTACAT TGCTGCGCTC
AAAGACGCCA ATCGAATCAT CGAGCTGGGC CAGGCGACCA GCAGCGATCA CCTGGCCCGC
GCCAGCCTGT ATCAATTCCT GGAATGCCCG CAGGCCGAAC GTTTCGACCT GGAGCACGCG
TTGCTGCTCA GCGAAGACCC GATTCAGCGC ATCAGGCTCA CCGAGCGCCT GAGTCAAATG
CCATCGAACC GCAGCGTCCA CTGA
 
Protein sequence
MTPRQHCLTC LQQTPPSVFE AALWVSAEHD AHFARHEVMS EMDQLQRQVG AALPVLPAAE 
LAQPLLRQLS ALGFQQDDWN PPKPDSALLH KIVQQRRGQP LGLALIAMEI ARRLDIALEG
VNFPGHFLLR VPGADHVLDP CGGRRLYPKD CRELLIRQFG PTLQLHVEHM KRATPTHMLQ
RLSRNLRHLH QLNDDYIAAL KDANRIIELG QATSSDHLAR ASLYQFLECP QAERFDLEHA
LLLSEDPIQR IRLTERLSQM PSNRSVH