Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1191 |
Symbol | |
ID | 1182827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1303986 |
End bp | 1304789 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392568 |
Product | hypothetical protein |
Protein accession | NP_791023 |
Protein GI | 28868404 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.50461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCCAC GTCAGCATTG CCTGACCTGC CTGCAACAGA CGCCGCCCTC GGTGTTTGAA GCGGCCTTGT GGGTATCGGC AGAACACGAC GCGCACTTTG CGCGCCATGA GGTGATGAGC GAGATGGACC AGTTGCAGCG TCAGGTCGGC GCAGCCCTGC CGGTCCTGCC CGCTGCCGAA CTCGCACAAC CGCTGTTGCG ACAACTCAGC GCCCTGGGCT TTCAACAGGA TGACTGGAAC CCTCCGAAAC CTGACTCCGC ACTGCTGCAC AAAATCGTGC AGCAACGACG CGGGCAGCCA TTGGGCCTGG CATTGATTGC AATGGAGATC GCACGACGGC TGGACATCGC ACTGGAGGGC GTCAACTTTC CCGGCCACTT TCTGCTCCGC GTGCCGGGTG CCGACCATGT GCTCGACCCT TGCGGCGGGC GCAGGCTGTA CCCCAAAGAC TGCCGCGAGC TGCTGATCCG CCAGTTCGGC CCGACCCTGC AACTGCACGT CGAACACATG AAGCGCGCCA CACCGACCCA TATGCTGCAG CGCTTGTCGC GCAATCTGCG CCACCTGCAT CAGCTCAACG ATGACTACAT TGCTGCGCTC AAAGACGCCA ATCGAATCAT CGAGCTGGGC CAGGCGACCA GCAGCGATCA CCTGGCCCGC GCCAGCCTGT ATCAATTCCT GGAATGCCCG CAGGCCGAAC GTTTCGACCT GGAGCACGCG TTGCTGCTCA GCGAAGACCC GATTCAGCGC ATCAGGCTCA CCGAGCGCCT GAGTCAAATG CCATCGAACC GCAGCGTCCA CTGA
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Protein sequence | MTPRQHCLTC LQQTPPSVFE AALWVSAEHD AHFARHEVMS EMDQLQRQVG AALPVLPAAE LAQPLLRQLS ALGFQQDDWN PPKPDSALLH KIVQQRRGQP LGLALIAMEI ARRLDIALEG VNFPGHFLLR VPGADHVLDP CGGRRLYPKD CRELLIRQFG PTLQLHVEHM KRATPTHMLQ RLSRNLRHLH QLNDDYIAAL KDANRIIELG QATSSDHLAR ASLYQFLECP QAERFDLEHA LLLSEDPIQR IRLTERLSQM PSNRSVH
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