| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1147 |
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| Symbol | |
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| ID | 1182783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1257094 |
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| End bp | 1257726 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392526 |
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| Product | transporter, LysE family |
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| Protein accession | NP_790981 |
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| Protein GI | 28868362 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTGGG CAGAATTTCT TACCGTCGCA CTGATTCACC TGCTGGCCGT CGCCAGTCCC
GGGCCTGATT TTGCGGTGGT GGTGCGTGAA AGCGTGACTC ATGGCCGCAA GGCCGGCACC
TGGGCGGCGC TGGGGGTTGG CTCGGCGATC TTTGTGCATG TGGGCTATTC GCTGTTGGGC
ATCGGGATTA TCGTTTCCCA GTCCATCGTG CTGTTCAATG CCTTGAAATG GGCGGCCGCC
GCCTACCTGC TGTACATCGG CATCAAGGCC CTGCGCGCCA AACCGGCCGC GGCGACGGAC
GATACCGCCA TCAAGGCCGT TGCCGGTGAG CGCAGCGCAC GGGGTGCCTA CATCAGCGGC
TTTGTCACCA ATGGCCTGAA CCCCAAGGCA ACGCTGTTTT TCCTGTCGTT GTTCACGGTC
GTGATCAACC CGCACACACC CTTGCTGGTG CAGGGAGGCT ATGGCGTCTA CCTTGCGGTT
GCGACGGCGG CGTGGTTCTG TCTGGTGGCG CGGTTGTTCA GTCAGGCGCG GGTGCGCGCC
GGTTTTGCAC GCATGGGGCA CTGGTTCGAT AGGGCCATGG GCGGCGTGCT GGTAGCGTTG
GGGATCAAGC TCGCGCTCAC CGAAGTGCGC TGA
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| Protein sequence | MYWAEFLTVA LIHLLAVASP GPDFAVVVRE SVTHGRKAGT WAALGVGSAI FVHVGYSLLG
IGIIVSQSIV LFNALKWAAA AYLLYIGIKA LRAKPAAATD DTAIKAVAGE RSARGAYISG
FVTNGLNPKA TLFFLSLFTV VINPHTPLLV QGGYGVYLAV ATAAWFCLVA RLFSQARVRA
GFARMGHWFD RAMGGVLVAL GIKLALTEVR
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