| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1135 |
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| Symbol | |
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| ID | 1182771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1246804 |
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| End bp | 1247700 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392514 |
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| Product | homocysteine S-methyltransferase family protein |
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| Protein accession | NP_790969 |
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| Protein GI | 28868350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.300332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC GCTCAACTGT AATTCTCGAT GGCGGCATGG GCCGCGAGCT ACAGCGTCGC
GGCGCGCCCT TTCGCCAGCC CGAATGGTCG GCGCTGGCTT TGAGTGAAGC ACCTGACGCC
GTCAGTGCGG TACATGCCGC TTATATCGAA AGTGGCGCTC AGGTCATTAC CAGCAACAGC
TATGCCGTGG TGCCCTTTCA TATCGGCGAA GAGCGTTTCG CCCGTGAAGG CCAGGCGCTG
GCTGCACTGG CCGGGCAATT GGCGCGCGGT TCAGCCGACG CCTCGGGTGG GCGTGCTCTG
GTCGCAGGTT CCATCCCGCC GTTGTTCGGT TCCTATCGCC CTGACCTGTA CCAGCCGGAA
CTGGCCGCTG ATGTCTTGAA GCCGCTGGTG GCCGGTCTGT CGCCGTATGT CGATCTGTGG
CTGGCCGAGA CGCAGAGCTG CATTCTTGAG GCGCAAACGA TCCGCGCCGG TCTGCCCGCT
GACGGCAAGC CGTTCTGGCT ATCGTTTACC CTCCAGGATG AAGACACCGA CGACGTCCCG
CGCCTGCGCT CCGGCGAACC GGTGGCCGAT GCGGCAAAGG CTGCCGCCGA AATGGGCGTG
GCAACGCTAC TGTTCAATTG CAGCCAGCCA GAAGTGATCG GCGCTGCGAT TGATGCGGCG
CGTGAGGTGT TCAACGCCCT GAACGTTGAC ATCGCCATTG GTGCATACGC CAATGCGTTC
CCGCCGCAGC CCAAGGACGC CAAGGCCAAC GATGGTCTGG ATGAACTGCG CGAAGACCTT
GACCCGCAGG GTTATCAGCA GTGGGCCGCG GACTGGGTCA AGCGCGGTGC CACGCACATC
GGCGGTTGCT GCGGGATTGG CCCGGAGCAC ATTGCGGTGC TGTCGCAAAA GCTCTGA
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| Protein sequence | MTQRSTVILD GGMGRELQRR GAPFRQPEWS ALALSEAPDA VSAVHAAYIE SGAQVITSNS
YAVVPFHIGE ERFAREGQAL AALAGQLARG SADASGGRAL VAGSIPPLFG SYRPDLYQPE
LAADVLKPLV AGLSPYVDLW LAETQSCILE AQTIRAGLPA DGKPFWLSFT LQDEDTDDVP
RLRSGEPVAD AAKAAAEMGV ATLLFNCSQP EVIGAAIDAA REVFNALNVD IAIGAYANAF
PPQPKDAKAN DGLDELREDL DPQGYQQWAA DWVKRGATHI GGCCGIGPEH IAVLSQKL
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