| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1109 |
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| Symbol | prfA |
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| ID | 1182745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1224310 |
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| End bp | 1225392 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392488 |
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| Product | peptide chain release factor 1 |
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| Protein accession | NP_790943 |
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| Protein GI | 28868324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTT CACTGCTCAA TAAGCTGGAT GTTCTCAGCG ACCGTTTCGA GGAACTGACC
GCACTGCTTG GCGATGCCGA AGTCATCAGC GATCAGACAC GCTTTCGCGC CTATTCCCGG
GAGTACGCCG AAGTGGAGCC GGTCGTTGCG CTCTACAAGC AACTGGCCAG GGTGCAAGGC
GATCTTGAGG GTGCGCAGGC TTTGTTGAAA GACAGTGACC CCGACATGCG CGAAATGGCA
GTCGAGGAAG TCCGCGAAAC CAAGCAGCAA CTGGTCGAGC TTGAGGCGCA ACTGCAACGC
ATGCTGCTGC CCAAGGACCC GAACGACGGT CGCAACGTGT TTCTGGAAAT CCGCGCCGGC
ACCGGCGGTG ATGAAGCCGC GATCTTCTCC GGCGACCTGT TCCGCATGTA CTCGCGCTAC
GCCGAGCGAC GTGGCTGGCG GGTGGAGATT CTGTCCGAGA ACGAAGGCGA GCATGGCGGT
TACAAGGAAG TCATTGCGCG GGTCGAAGGC GACAGCGTCT ATGGCAAGCT GAAATTCGAG
TCCGGCGCGC ACCGTGTACA GCGTGTGCCC AAGACCGAAT CCCAGGGCCG CATTCACACC
TCGGCCTGCA CGGTTGCGGT GCTGCCCGAG CCTGATGAGC AACAGGCGAT CGAGATCAAC
CCGGCCGACC TGCGCGTCGA CACCTATCGT TCTTCGGGTG CCGGTGGTCA GCACGTCAAC
AAAACCGACT CGGCCATCCG CATTACCCAC TTGCCATCGG GTATTGTCGT CGAGTGTCAG
GAAGAGCGTT CGCAACACAA GAACAGAGCC CGGGCGATGT CCTGGCTGTC TGCCAAACTG
AATGATCAGC AGACCAGCGC TGCGGCCAGT GCCATCGCCA GCGAGCGCAA GCTGCTCGTA
GGTTCGGGTG ATCGTTCGGA GCGCATACGT ACTTACAATT TCCCTCAAGG GCGAGTGACG
GATCACCGCG TGAACCTGAC TCTGTATTCG CTGGATGAAG TTCTGGCCGG CGGAGTCGAT
GCAGTGATAG AGCCGCTACT CGCTGAATAT CAGGCTGATC AACTTGCGGC ACTGGGTGAG
TAA
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| Protein sequence | MKASLLNKLD VLSDRFEELT ALLGDAEVIS DQTRFRAYSR EYAEVEPVVA LYKQLARVQG
DLEGAQALLK DSDPDMREMA VEEVRETKQQ LVELEAQLQR MLLPKDPNDG RNVFLEIRAG
TGGDEAAIFS GDLFRMYSRY AERRGWRVEI LSENEGEHGG YKEVIARVEG DSVYGKLKFE
SGAHRVQRVP KTESQGRIHT SACTVAVLPE PDEQQAIEIN PADLRVDTYR SSGAGGQHVN
KTDSAIRITH LPSGIVVECQ EERSQHKNRA RAMSWLSAKL NDQQTSAAAS AIASERKLLV
GSGDRSERIR TYNFPQGRVT DHRVNLTLYS LDEVLAGGVD AVIEPLLAEY QADQLAALGE
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