Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1108 |
Symbol | hemA |
ID | 1182744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1223036 |
End bp | 1224313 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392487 |
Product | glutamyl-tRNA reductase |
Protein accession | NP_790942 |
Protein GI | 28868323 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTCC TTGCACTCGG TATCAACCAT AAGACCGCCT CGGTCGACGT TCGCGAGCGC GTGGCATTTA CCCCGGAGCA GCTGGTTGAT GCGCTGCAGC AGCTTTGCCA TCTGACCGAA AGTCGTGAGG CCGCGATTCT ATCGACGTGC AATCGCAGCG AGTTGTACAT CGAACACGAG CACCTCGGCG CGGACAGCAT TCTGGCCTGG CTTGCCAATT ATCATCACCT TAGCCTCGAA GAGTTGCGCG CCAGCGCCTA TGTTCACGAG GACGATGCGG CCGTGCGACA CATGATGCGT GTGGCCTCGG GGCTCGACTC GCTGGTGCTG GGCGAGCCGC AGATTCTTGG TCAGATGAAG TCCGCGTACG CCGTAGCCCG CGAAGCCGGA ACGGTCGGGC CTTTGCTGGG GCGTCTGTTT CAGGCCACGT TCAGCGCCGC CAAGCAGGTG CGCACCGACA CCGCCATCGG CGAAAACCCG GTCTCCGTAG CCTTTGCCGC CGTCAGCCTG GCAAAACAGA TTTTCAGCGA CCTGCAACGC AGCCAGGCCC TGTTGATCGG TGCCGGCGAG ACCATTACTC TGGTCGCCCG CCACCTGCAC GATCTGGGCG TCAAGCGTAT CGTGGTTGCC AACCGTACGC TGGAGCGCGC GAGTATCCTC GCCGCCGAGT TCGGTGCCCA CGCCGTGTTG TTGTCGGATA TCCCGGCCGA GCTGGTCAAC AGCGACATCG TGATCAGCTC CACCGCCAGC CAGTTGCCGA TTCTGGGCAA GGGCGCGGTG GAAAGCGCGC TGAAGCTGCG CAAACACAAA CCGATTTTCA TGGTCGATAT CGCTGTACCG CGCGATATCG AGCCTGAAGT CGGCGAGCTG GACGACGTTT ATCTGTACAG CGTCGATGAT CTGCATGAAG TGGTGGCAGA GAACCTCAAG AGTCGCCAGG GCGCTGCGCT GGCTGCTGAA CAACTGGTCA GCGTCGGTGC CGAAGACTTC ATGTCGCGGC TGCGCGAGTT GGCGGCGGTG GATGTACTGC GCGCCTATCG TCAGCAAAGC GAACGGCTGC GTGACGAAGA ATTGAGCAAG GCGCAGCGCA TGCTGGCCAA CGGCAGTAAT GCCGAAGACG TACTGATCCA GCTGGCGCGT GGCCTGACCA ACAAATTGCT GCATGCGCCC AGCGTGCAGC TCAAGAAGCT GTCTGCCGAA GGTCGCGTCG ATGCGCTGGC CATGGCCCAG GAACTATTTG CCCTCGGTGA GGGCTCGACG GATAAAACCC CGCAATGA
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Protein sequence | MAFLALGINH KTASVDVRER VAFTPEQLVD ALQQLCHLTE SREAAILSTC NRSELYIEHE HLGADSILAW LANYHHLSLE ELRASAYVHE DDAAVRHMMR VASGLDSLVL GEPQILGQMK SAYAVAREAG TVGPLLGRLF QATFSAAKQV RTDTAIGENP VSVAFAAVSL AKQIFSDLQR SQALLIGAGE TITLVARHLH DLGVKRIVVA NRTLERASIL AAEFGAHAVL LSDIPAELVN SDIVISSTAS QLPILGKGAV ESALKLRKHK PIFMVDIAVP RDIEPEVGEL DDVYLYSVDD LHEVVAENLK SRQGAALAAE QLVSVGAEDF MSRLRELAAV DVLRAYRQQS ERLRDEELSK AQRMLANGSN AEDVLIQLAR GLTNKLLHAP SVQLKKLSAE GRVDALAMAQ ELFALGEGST DKTPQ
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