| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1106 |
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| Symbol | lolB |
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| ID | 1182742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1220460 |
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| End bp | 1221077 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392485 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | NP_790940 |
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| Protein GI | 28868321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTGC GCCACGTAAT CGTATTCAGC TTCATCGCCC TGCTCGCCGG CTGCGCCGGC
CTCACCTCCC GCGAAGCGGT TCAGGGCAAG GGCGACCCCG CGCAATGGCG CGAACACAAA
CAGCAACTGA GCAGCCTTGA TGGCTGGCAG ATCAACGGCA AGGTCGGCAT CCGCGCACCG
AAGGATTCCG GCAGCGGCAC GTTGTTCTGG CTGCAGCGTC AGGATTACTA CGACATTCGC
TTGTCCGGCC CGCTGGGCCG TGGTGCTGCG CGACTGACCG GCAGGCCTGG CGCTGTGGCG
CTTGAGGTTG CCAATCAGGG CCGCTACGAA GCCCCGACCC CGGAAACGCT TCTGCAGGAT
CAGTTAGGCT GGAAACTGCC GGTCTCTCAC CTGGTGTGGT GGGTGCGCGG CTTGCCGGCG
CCTGACAGCA AAAGCAACGT GACACTCGAT GGCGACAGCC GTCTGGCCAG CCTTGAGCAG
GATGGCTGGC AGGTCGAATA CCTCAGTTAC GTCGAACAGA ACGGCTATTG GCTGCCGGAA
CGCGTCAAGC TGCACGGTCA GGACCTTGAT GTCACGCTGG TCATCAAGGA CTGGCAGCCT
CGCAAACTGG GGCAATGA
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| Protein sequence | MFLRHVIVFS FIALLAGCAG LTSREAVQGK GDPAQWREHK QQLSSLDGWQ INGKVGIRAP
KDSGSGTLFW LQRQDYYDIR LSGPLGRGAA RLTGRPGAVA LEVANQGRYE APTPETLLQD
QLGWKLPVSH LVWWVRGLPA PDSKSNVTLD GDSRLASLEQ DGWQVEYLSY VEQNGYWLPE
RVKLHGQDLD VTLVIKDWQP RKLGQ
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