Gene PSPTO_1059 details

Gene Information

• Locus tag: PSPTO_1059
• ID: 1182693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1154539
• End bp: 1156428
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637392438
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_790895
• Protein GI: 28868276
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGG CCCTCGGGTT TGGTCTTGTA CTTGTTTTTA CTGCCATTCT TGCCCTGACC 
GGCTGGACCA GCATGACCAG TCTGATCAAT CGCAGCAACT GGATGAGCGA CATTACGTCA 
CTTAATTCAC AACTGACCAA ACTGCGGGTT GCCCGCCTGC AGTACATGGT GGCTGACGGC 
GACGAGAAAG TCGCAGAGGC CGTTCAGGTT TCGCTGGATG GCTTCAAGAA TTATCAGCAG 
AAGCTGCTGG CCACGTTCAA GAGCCCTGAG AACGTGAAAA TGCTCGAACA ATTGTCTGCG 
GTGATCGCTG ACTATCAGAA ATCGCTGAAT AATATGCGCA GCGGGTACAA GGCCAGCACT 
GCGGCGCGTG ATGAACTGAC CATGCATGCC GGCAAAAGTA TCGATGTGTT TGAGCTGCTT 
CAGGATGAAG TAAAAAAAAT GGACCCTGCC GATGCCAATC GGTTTGAGCA ATACCGGATC 
GTCACTGATG CAAAGGAAAA CCTGAGGCTC GCGCGTTATG AAGTGCGTGG CTACACCACC 
AATGCCACGC CCGAAACCGA GCAGGCAGCC GTGGCAAAAC TGGATCTGGC CATCAAGGAT 
CTGGACACGC TGAAAACAAC GTTCAGCAGC ACCCAGGCCG ATCAGCTCAG GCAACTGGAA 
ACCTCGCTGA TGGCCTACCG CACCACGCTG CAGAACTTCA AGGCCGCGAC TGCTAACATC 
GCTCTGGCTC GCCAGGAAAT GACGGTACAG GGCCAGGACA TCGTCAAAAT CAGCGAAGCC 
ATGTATCAGT TGCAACTGAA TCGCCGCGAT CAGGAAAGCG CGCAGGCCCG CACTACGCAG 
ATCACTTGCA CGCTGCTGGC CATCATTTTG GGCATGATCG CAGCCGTGAT CATCACCCGG 
CAGATTACCC GTCCATTGCA GGAAACCCTG GCAGTGGTCG ATCGCATTGC TTCCGGCGAC 
CTGACCCAGA CCCTGGCGGT CACTCGTCGT GACGAGCTGG GTGTGTTGCA GCAAGGTATT 
CAGCGCATGG GCAGCACGCT GCGTGAGCTG ATCGGCGGGA TTCGCGACAG TGTCGTACAG 
ATCGCCAGTG CCGCCGAAGA GCTATCGGCC GTTACCGAAC AGACCAGCGC CGGCGTCAAC 
AGCCAGAAAG TCGAAACCGA TCAGGTGGCC ACGGCCATGC ACGAGATGTC GGCCACGGTT 
GCAGAAGTGG CGCGTAACGC CGAGCAGGCC TCGCAGGCAG CGTCCAACGC CGACCGCGAA 
GCACGCGATG GCGACAAGGT GGTGGGCGAA GCGATTGCCC AGATCGAGCG TCTGGCCAAC 
GAAGTGGGTC GCTCGGCAGA CGCCATGGGC CTGCTGGAGC AGGAAAGCGA CAAGATCGGC 
AAGGTCATGG ATGTGATCAA GGCGGTGGCC GAACAAACCA ACCTGCTGGC CCTCAACGCC 
GCCATCGAGG CCGCGCGTGC CGGGGAAGCC GGGCGTGGCT TTGCCGTGGT TGCCGACGAA 
GTTCGTGGCC TGGCGCAGCG TACGCAGCAA TCCACCGTCG AGATCGAGAC GCTGGTTGCC 
GCCCTGCAAA GCGGCACGCG CCAAGTGTCC AGCATCATGC TGAGCAGCCG CGAACTGACC 
GTCAGCAGCG TACAGCTGAG CCGTCAGGCC GGTACGTCGC TGGGCAGCAT CACCCAGACA 
GTCTCCAACA TTCAGGCCAT GAACCAGCAA ATCGCCGCCG CTGCCGAGGA GCAGAGCGCC 
GTAGCCGAGG AAATCAGCCG CAGCATCGTC AACGTGCGCG ATGTGTCCGA GCAGACCGCC 
TCGGCCAGCG AGGAAACCGC TGCCTCCAGC GTCGAGCTGG CGCGCCTGGG CGGACAATTG 
CAGACGATGG TCAGCCACTT CCGGATCTGA 

 

Protein sequence

MKLALGFGLV LVFTAILALT GWTSMTSLIN RSNWMSDITS LNSQLTKLRV ARLQYMVADG 
DEKVAEAVQV SLDGFKNYQQ KLLATFKSPE NVKMLEQLSA VIADYQKSLN NMRSGYKAST 
AARDELTMHA GKSIDVFELL QDEVKKMDPA DANRFEQYRI VTDAKENLRL ARYEVRGYTT 
NATPETEQAA VAKLDLAIKD LDTLKTTFSS TQADQLRQLE TSLMAYRTTL QNFKAATANI 
ALARQEMTVQ GQDIVKISEA MYQLQLNRRD QESAQARTTQ ITCTLLAIIL GMIAAVIITR 
QITRPLQETL AVVDRIASGD LTQTLAVTRR DELGVLQQGI QRMGSTLREL IGGIRDSVVQ 
IASAAEELSA VTEQTSAGVN SQKVETDQVA TAMHEMSATV AEVARNAEQA SQAASNADRE 
ARDGDKVVGE AIAQIERLAN EVGRSADAMG LLEQESDKIG KVMDVIKAVA EQTNLLALNA 
AIEAARAGEA GRGFAVVADE VRGLAQRTQQ STVEIETLVA ALQSGTRQVS SIMLSSRELT 
VSSVQLSRQA GTSLGSITQT VSNIQAMNQQ IAAAAEEQSA VAEEISRSIV NVRDVSEQTA 
SASEETAASS VELARLGGQL QTMVSHFRI