| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1010 |
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| Symbol | phoD |
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| ID | 1182644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1103683 |
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| End bp | 1105254 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392391 |
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| Product | alkaline phosphatase D |
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| Protein accession | NP_790848 |
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| Protein GI | 28868229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT TCAATCCGGA CCGCCGCCGC ATCATTACCG GCGTGGCCGG GGCCACACTG
CTGTCGATCC TCAGCCCGTT TGCACGCAGT GCTGGTGTCG ATTATCCGTT CACACTGGGC
GTGTCGTCAG GCGATCCGTT GCCGGACGGC TTCGTGATCT GGACACGTCT TGCCCCCCAG
GTGATCACCC CGGCAGGCGA CGGTGGCTTG AGCAAAGCCG TCGAGGTGCG CTGGAAAATC
GCCAGCGACG CCGCCATGAC GCGCATCGTG CGCTCGGGCC AAGCCACCGC CCAGTCACGC
TTTGCGCATT CGGTGCACGT TGAAGTGAGC GGCTTGCAAC CGGGGCGGCC CTATTGGTAT
CAGTTCGAAA GCCTGGGCGC ACAAAGCCCG GTGGGTCAGG CCTGCACGGC CCCACCCGCG
ACGGCCATGG CTGCGGCGAG GTTCGGCTTT GTATCGTGCT CGCATTGGGA AGCCGGGTAT
TTCAGCGCCT ATCGGCACCT GGCTGCGGAG CGACCGGATC TGGTGTTCTT TCTCGGTGAC
TATATCTATG AAGCAAACGT TTCTCCCGCG AATACACAGT TCCCACGCCG CCACGCCACA
TCAGACCCGA TAGATCTGGC TGGCTATCGC AACCGATACG CGCAATACAA GACCGACCCG
GACCTGCAAG CCCTGCATGC CTGCGCGCCA AGCGTTGTCA CCTGGGACGA TCACGAAGTG
CAGAATGACT ATGCCGCGCA GTGGTCTCAA GACCCCAGCG TTCCGGTAGA GAGCTTTCTG
CGTCGCAGAG CCGCCGCTTA TCAGGCGTTT TACGAGCACA TGCCGTTGCG CGCCAGCAGT
TTGCCCAAAG GTCCCAACAT GCGTATTTAC CGGAACCTGG ACTATGGCCG CCTGGCACGC
TTTCATGTGC TGGACGGTCG GCAGTATCGT TCCGAACAGG CGTGCATCCA GGCCAACGGT
AGCCGTCGAG GCTACGTAGC GCCCAGCGAT TGCACGGATC TGAGTGACCC GAAACGCACC
ATGCTGGGCT GGGAACAGGA AGCCTGGCTG GACCGCAGCT TCGCTGAGTC ACCTGGACAA
TGGAATGTCA TTGCCCAGGA CTTGCTGGTC GCTCCGCTGG AACAGCGCAA TCTCAAAACG
CAGGCGCTGG GCCACTGGAC CGATGGCTGG GACGGCTACG CGGCGACCCG CGAGCGCATG
CTGGCATCCC TGCAACGCCA CCAGACCCGC AACCCGGTGT TCTGGGGGGG CGACATCCAT
TCGTTCTGGA CCACCGACCT GCACGCCGAT GCGGGCAATC CGGATTCAGC CGTCGTCGCC
ACTGAATTCG TCGGCACCTC GGTGACATCC GGCGGACCGC CATTCGAGGC CTTCAACAGC
ATTCTCGGTC TAAACCCCCA CGTGAAGTTT TTTGACAGCC GCCAGCGTGG CTATGTGGCG
GTGGACCTCA GCGAGCAACA GATGCTGACC CGCTTTCAGG TGGTGTCGGA TGTGCTCGAC
CCCGCTGCCA GCGTGTCAAC GCTCAAGCGT TTTGCGGTGG AGGCTGGCAA AGCCGGGGCC
GTTCCTGTGT AG
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| Protein sequence | MTDFNPDRRR IITGVAGATL LSILSPFARS AGVDYPFTLG VSSGDPLPDG FVIWTRLAPQ
VITPAGDGGL SKAVEVRWKI ASDAAMTRIV RSGQATAQSR FAHSVHVEVS GLQPGRPYWY
QFESLGAQSP VGQACTAPPA TAMAAARFGF VSCSHWEAGY FSAYRHLAAE RPDLVFFLGD
YIYEANVSPA NTQFPRRHAT SDPIDLAGYR NRYAQYKTDP DLQALHACAP SVVTWDDHEV
QNDYAAQWSQ DPSVPVESFL RRRAAAYQAF YEHMPLRASS LPKGPNMRIY RNLDYGRLAR
FHVLDGRQYR SEQACIQANG SRRGYVAPSD CTDLSDPKRT MLGWEQEAWL DRSFAESPGQ
WNVIAQDLLV APLEQRNLKT QALGHWTDGW DGYAATRERM LASLQRHQTR NPVFWGGDIH
SFWTTDLHAD AGNPDSAVVA TEFVGTSVTS GGPPFEAFNS ILGLNPHVKF FDSRQRGYVA
VDLSEQQMLT RFQVVSDVLD PAASVSTLKR FAVEAGKAGA VPV
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