Gene PSPTO_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0998 
Symbol 
ID1182632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1089883 
End bp1090257 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content55% 
IMG OID637392380 
Productalkylphosphonate utilization operon protein PhnA, putative 
Protein accessionNP_790837 
Protein GI28868218 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.29749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTTA CCCCCCTTGA TGTGAGAACC ATTGTGAGCT TACCCTCCTG CCCGAAATGC 
AATTCCGAAT ACACTTACGA AGACGGCAGC CTGCTGATCT GCCCGGAATG CGCCCACGAA 
TGGTCCGCTG ACGCCGGCAG CGCCGATGCT TCCGACGACG TGAAGGTCAT CAAGGACTCC 
ACGGGCAACG TGCTACAGGA CGGCGATACC ATCACTGTGA TCAAGGACCT GAAAGTCAAA 
GGCTCATCGC TGGTGGTCAA GGTCGGCACC AAGGTCAAGA ATATCCGTCT GGTCGATGGC 
GACCACGATA TCGATTGCAA GATTGATGGC ATCGGCGCCA TGAAACTGAA GTCCGAGTTC 
GTCCGCAAAG TCTGA
 
Protein sequence
MVFTPLDVRT IVSLPSCPKC NSEYTYEDGS LLICPECAHE WSADAGSADA SDDVKVIKDS 
TGNVLQDGDT ITVIKDLKVK GSSLVVKVGT KVKNIRLVDG DHDIDCKIDG IGAMKLKSEF 
VRKV