Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0997 |
Symbol | |
ID | 1182631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1087661 |
End bp | 1089664 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392379 |
Product | acyltransferase family protein |
Protein accession | NP_790836 |
Protein GI | 28868217 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.378364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATTC CTCATAACCC TGCGCTCGGC TATCGCCCCG AGATCGACGG CCTGCGCGCG TTGGCGGTGA TTCCCGTCAT TCTGTTTCAC GCCGGCCTGC CGCTGTTCAG CGGTGGATTC GTCGGGGTCG ATATCTTTTT TGTGATTTCG GGCTATCTGA TCACCTCAAT CATTCTCGCG GAAAAGATCA ACGGGAAGTT CTCGCTGATC AATTTCTATG AGCGACGTGC AAGGCGCATC CTGCCAGCGC TGTTCGTGGT CATGCTGGTG TGCGTGCCGG TCGCCTGGTT GACGCTTGAC CCACCGGACC TCAAGTACTT CGCCAAGAGC CTGGTGGCCG TGCCGATGTT TTCGTCAAAC GTGCTGTTCT GGCTCGAAAG CGGCTATTTC GATGCGACGG CTGAACTCAA ACCACTGCTG CACACCTGGA CGCTTGCGGT GGAGGAACAG TACTACCTGT TCTTTCCGCT GCTGCTGATG CTCGGCTGGC GCATGGGCCG CACTAGACTG GTGATATTGC TGACCCTCAT CGCGCTGGGC AGCCTGACGC TTTCGCAACT GGGTGCACGT AACGACGCCA GTAGCAGTTT TTACCTGCTG CACGCACGCG CATGGGAATT ACTGACCGGC TCGTTTATCG CGCTCTACTG TGTCTGGCGA ACGCGCCACG CGCCCAGCGT CAGCCTTCTC GATCAGGCGG CTGCGGCGCT GGGCGTGTTA TTGATTGGCT ACGCCGTCGT GCAGTTCGAC GGCAGCACGC CGTTCCCTGG CCTAAATGCG CTGGTGCCGG TGCTCGGTGC AGCGCTGATC ATCGTCTTTG CGCAAGGCAA GACTTGGGTT GGTCGAGCGC TGAGTTCACC GGCGCTGGTG CTCATCGGCA TGATCAGCTA CAGCGCGTAC CTGTGGCACC AGCCGCTTTT CGCCTTTGCT CGTCAGCGCA GCCTGAATGA GCCCGGCCTG CCGTTGATGC TGAGCCTGAC CCTACTGTCG CTGATAGTGG CCTGGCTGAG TTGGCGCTAT GTCGAGCAGC CTTTTCGCAA ACAGGGCGCA TTCAATCGCC AACAGGTGTT CACCTCGGCA GGCGTCGCGT CGGCGCTGTT TATCGCGCTG GGGCTGACCG GTTACCTCAA CAACGGCTTC AGCCAACGCT TCAACGTCGA TCCGGCCATT TATGAGGAAT TTGCCGACCC GCAGATTCGT GACAAATGCA CTCAGACCAC CGTCGACTTT TGCCTGTTCG GCGCAGCCAA CCCAGACGCC ACACCGGCTC TGGCGGTATT TGGCGACAGC CATTCGGAAG CCCTGTTATC AACCTTCGAT AGCGTTGCCC GCCAGCAGGG CAAAACCATT GTTCATATCG GCCTGGGTGG CTGTCTGCCG TTGTTGGGCG TGGACGTCGC CAGCGGCAAT TACGGCCCCG GCGTCTGCGA GGCGCTGGCC AGCCGCGAGT TTGAGTACGT GAAAAAGCAC CGCATTGCAA AAGTGGTGCT GGTCGCGCGC TGGACGCTTT ATACCGACGG CGATTACGGT AAAAAACCGA TGAGCAAGTA TTTCCTGATT TCCGCCGACA GTCAGGAAAG AAGCCGTGCA GCCTCACGCG CCGTGTTCAA GCAGGCGCTC GAAGCCACCG TTCGGGCGTA CCGCGACATC GGCAGCGAAG TGGTCATCAT TGCGCAGGTG CCGCAGCAGT TGATCAACCC GGAAAACCTT TATTACCGGC TGGCTCGCGA CACATCGGAC AGCCAGACGC AGAAGTTGCA GCGGATCAGC GAATTGTCAG TGCCGGTCGC AACGCATGAA CATTTGCAGC GCTTCACGCG CGAAGTGTTC GGGCAGGCCA GCGAGTCGAA GCAGATCGGG CTGATCACGC CGGATGCAGC GTTCTGCAAG GACAGCCAGT GCCTGATAGG CGACATGAAC TCGTACTACA AGGACTTCAA CCACCTCAAC GCCAAAGGCG CCGGGCTGCT TGCCGGTCAG ATCAGCCAAA TTGTTGCGCA GTGA
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Protein sequence | MGIPHNPALG YRPEIDGLRA LAVIPVILFH AGLPLFSGGF VGVDIFFVIS GYLITSIILA EKINGKFSLI NFYERRARRI LPALFVVMLV CVPVAWLTLD PPDLKYFAKS LVAVPMFSSN VLFWLESGYF DATAELKPLL HTWTLAVEEQ YYLFFPLLLM LGWRMGRTRL VILLTLIALG SLTLSQLGAR NDASSSFYLL HARAWELLTG SFIALYCVWR TRHAPSVSLL DQAAAALGVL LIGYAVVQFD GSTPFPGLNA LVPVLGAALI IVFAQGKTWV GRALSSPALV LIGMISYSAY LWHQPLFAFA RQRSLNEPGL PLMLSLTLLS LIVAWLSWRY VEQPFRKQGA FNRQQVFTSA GVASALFIAL GLTGYLNNGF SQRFNVDPAI YEEFADPQIR DKCTQTTVDF CLFGAANPDA TPALAVFGDS HSEALLSTFD SVARQQGKTI VHIGLGGCLP LLGVDVASGN YGPGVCEALA SREFEYVKKH RIAKVVLVAR WTLYTDGDYG KKPMSKYFLI SADSQERSRA ASRAVFKQAL EATVRAYRDI GSEVVIIAQV PQQLINPENL YYRLARDTSD SQTQKLQRIS ELSVPVATHE HLQRFTREVF GQASESKQIG LITPDAAFCK DSQCLIGDMN SYYKDFNHLN AKGAGLLAGQ ISQIVAQ
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