Gene PSPTO_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0995 
Symbol 
ID1182629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1085145 
End bp1086818 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content59% 
IMG OID637392377 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_790834 
Protein GI28868215 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.467879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGT TTCTGCCTCG TTTTCTACGT CGGCGAACGA CAACAACCGT GTTGCGCCGC 
TTCAAGATCA CCCCGCGCCT GGTGATCTGC TTTGGAATCA CCTCTCTGCT GACGGTCGCA
CTGGGCGCAT TTTGCCTGCT GCAGATGCAG GAAATCCGCA ATCAGAGCGA AACGGTCGAA
AGCGGTGCGC TGCCGAGTAT TGCTATGGCC GACGCCATCG CCATCGGCCT GGTCAAACTG
CGCAGCGAAA CCACCCGCCT GATCGCCAAC GCTGATGATC CGGGATCGGT CATCAACAGC
AAGATAAACG TCGAACAGCT CAGAAACGAG GTCGAGAAAG GTTTCTCGGA ATACCTCGCA
CGTGTGCAAT CAGGCACCGA ACATGATTCG ATCATCGCGC TACAGGACGC TTATAAAGCC
TTTATGCCGG GCTTGCAGGA ACAGATCGCG CTGATTGAAC AGAACAAACT GGATGAGGCC
AGAATGCTGG CCAACACCAT GCTCACGCTG CAGGGCGACC TGATGGACAT GCAGGTGCAG
TTGCTGCGAG AGCTGAACAA GCAGAGTGCC GCCAGCGCTG TAGACGCGGC CGGAGCCAGT
TACGCACAAG CGCGAATTAT CGCCCTGAGC GCCATCGCCG TCGTATTGAC GCTAACCCTG
CTGCTGGCGT GGCGCCTGAG CGTCAGCATC ATTCATCCAG TGCGCCAGGC GTTGCACATC
GCCAGCACCA TCGCCGATGG CGACCTGACT GAACACCAGA TTGCCGACGG CAAGGACGAA
ACCGCGCAAT TATTGATCAC CCTCGGGCGC ATGCGGACCA ACCTGCACGG TACGATCGAG
CAAATTTATG CGGCGGCCAC CCAGTTGTCG CAGTCGGTGC AGGAGATGGG CACCATCGCC
GAGGTCAGCG CGCTCAATCT GCAATTACAG AACACCGAAA TCGAACAGGC TGCGGTCGCC
GTCAACCAGA TGAGCCAGGC GGCCGTCGAG GTGGCGGGCA ATGCCAGCAA TACTGTGACT
GAATCCGAGG CCTCGACCCA GGCCGCGGCG CAGGGTCAGA ACAAGCTCTC GGCAACCATC
AGTTCGATCA AGGAGCTGAC CGAAAACGTG CTGGACTCTT CGCATCAAGC CGAAGGGCTG
GCCGAACGCA CGCAAAGCAT CAGCAGCATC CTCGATGTGA TTCGTGCGAT TGCCAACCAG
ACCAATCTGC TCGCCCTGAA TGCCGCGATC GAAGCCGCAC GTGCAGGCGA AGCCGGGCGC
GGGTTTGCCG TGGTGGCCGA TGAAGTACGC TCGCTGGCGC AACGTACCAG TGCGTCTACC
GCAGAAATCG AAGGGTTGAT CAGCGGCGTG CAACAAAGTA CCCAGCAAAC TGCCAGTTCA
CTGCGCCACA CGGCAACCCA GGCAAACCTG ACACTCGAAC AGGCTGCATC GACCGGCGCA
GCGTTGACAG TGATCATCAA TGCGACTGCC ACGATCAATG ATCGCAACCT GTTGATCGCC
AGCGCCGCCG AGCAGCAGGC GCAAGTTGCG GGCGAAGTGG ACCGTAACCT GAGCAGCATT
CGCGATCTTT CCAGTCAGAC GGCTTCAGGC GCACAGCAAA CCACCGTCGC GAGCAACGCA
CTGTCGATGC TGGCGACGGA CCTGAACCTG ATGGTCCAGC GGTTTGTGCT TTGA
 
Protein sequence
MKKFLPRFLR RRTTTTVLRR FKITPRLVIC FGITSLLTVA LGAFCLLQMQ EIRNQSETVE 
SGALPSIAMA DAIAIGLVKL RSETTRLIAN ADDPGSVINS KINVEQLRNE VEKGFSEYLA
RVQSGTEHDS IIALQDAYKA FMPGLQEQIA LIEQNKLDEA RMLANTMLTL QGDLMDMQVQ
LLRELNKQSA ASAVDAAGAS YAQARIIALS AIAVVLTLTL LLAWRLSVSI IHPVRQALHI
ASTIADGDLT EHQIADGKDE TAQLLITLGR MRTNLHGTIE QIYAAATQLS QSVQEMGTIA
EVSALNLQLQ NTEIEQAAVA VNQMSQAAVE VAGNASNTVT ESEASTQAAA QGQNKLSATI
SSIKELTENV LDSSHQAEGL AERTQSISSI LDVIRAIANQ TNLLALNAAI EAARAGEAGR
GFAVVADEVR SLAQRTSAST AEIEGLISGV QQSTQQTASS LRHTATQANL TLEQAASTGA
ALTVIINATA TINDRNLLIA SAAEQQAQVA GEVDRNLSSI RDLSSQTASG AQQTTVASNA
LSMLATDLNL MVQRFVL