Gene PSPTO_0978 details

Gene Information

• Locus tag: PSPTO_0978
• ID: 1182607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1063668
• End bp: 1064438
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637392355
• Product: hypothetical protein
• Protein accession: NP_790817
• Protein GI: 28868198

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.279934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTTGAAC TAGGCAATCG AGGTTTTCAA GTGAATAAAT GGTGGATTCC AGCTTTAACG 
ACACTGGCCT TGCTGAACGG CTGCGCCAGT GTGGAACGTG GCTCGATTCC GGTCGTGGAT 
TCGAGCTCCA AGGTGTCCAA TAGCGAGCGT GCAGCAGCGT CGCGCAACGG TACTTATCGA 
AGCACCGCCC CTGTTCAGCA ACAGCCGCAA GCTGTACCGC AGGATAATGG CGTGGTGGTG 
ATGGTGCCGG GCGCGGCGGG TGCGGGTGCA GGGGAAAGCT TCTCTGCACC GGCCAGTCAG 
GCCCCGTTCA GCGTCAATAC GCCGCCTGTC GACGCAGCGC CTGTCAATCA GGCGCCGATC 
AATCCGGCTC CGGTGAATAA CAGCTACAGC ATGCCGGCTG CGTCTGCACC GACCGGGATC 
CCGTCCAGCG GCGGCGGTCT GTCTGAAGAC GAACAGCTTG ATGGCCCGGT ACTGGCCTTG 
TTGACCACGG CGCAGCAACA GCAAGGCAGC GGCGACCTCA ACGGTGCGTC CTCCAGCCTT 
GAGCGCGCCC AGCGTGTTGC GCCGCGCGAA CCTCAGGTGC TCTATCGTCT GGCCCAGGTG 
CGTCTGGCTC AGGGCGATGC CGCCCAGGCT GAACAATTGG CCCGTCGCGG TCTGACGTAC 
GCCAATGGGC GTGCCAGCCT TCAAGCCAGC CTGTGGGGGT TGATCGCTCA GTCTCGCGAA 
AAGCAGGGTG ATGCGGCCGG TGCTGCGCTG GCTCGTCAAA AGGCTCGCTG A 

 

Protein sequence

MVELGNRGFQ VNKWWIPALT TLALLNGCAS VERGSIPVVD SSSKVSNSER AAASRNGTYR 
STAPVQQQPQ AVPQDNGVVV MVPGAAGAGA GESFSAPASQ APFSVNTPPV DAAPVNQAPI 
NPAPVNNSYS MPAASAPTGI PSSGGGLSED EQLDGPVLAL LTTAQQQQGS GDLNGASSSL 
ERAQRVAPRE PQVLYRLAQV RLAQGDAAQA EQLARRGLTY ANGRASLQAS LWGLIAQSRE 
KQGDAAGAAL ARQKAR